Analysis of interatomic Contacts of Structural Units in PDB entry:
8UCQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8UCQ entry

There are 2 chains in PDB entry 8UCQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 LEU 4GLY 1817
A
 LEU 4GLY 1817
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are150 helices in PDB entry 8UCQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
4 18Right-handed alpha
Helix 2
AA2
B
24 37Right-handed alpha
Helix 3
AA3
B
44 57Right-handed alpha
Helix 4
AA4
B
61 76Right-handed alpha
Helix 5
AA5
B
98 108Right-handed alpha
Helix 6
AA6
B
115 131Right-handed alpha
Helix 7
AA7
B
139 155Right-handed alpha
Helix 8
AA8
B
158 187Right-handed alpha
Helix 9
AA9
B
246 251Right-handed 310
Helix 10
AB1
B
296 321Right-handed alpha
Helix 11
AB2
B
334 354Right-handed alpha
Helix 12
AB3
B
354 360Right-handed alpha
Helix 13
AB4
B
376 390Right-handed alpha
Helix 14
AB5
B
396 414Right-handed alpha
Helix 15
AB6
B
415 417Right-handed 310
Helix 16
AB7
B
418 429Right-handed alpha
Helix 17
AB8
B
429 436Right-handed alpha
Helix 18
AB9
B
440 456Right-handed alpha
Helix 19
AC1
B
458 469Right-handed alpha
Helix 20
AC2
B
477 489Right-handed alpha
Helix 21
AC3
B
496 506Right-handed alpha
Helix 22
AC4
B
542 567Right-handed alpha
Helix 23
AC5
B
634 640Right-handed alpha
Helix 24
AC6
B
642 651Right-handed alpha
Helix 25
AC7
B
660 671Right-handed alpha
Helix 26
AC8
B
675 684Right-handed alpha
Helix 27
AC9
B
687 701Right-handed alpha
Helix 28
AD1
B
707 717Right-handed alpha
Helix 29
AD2
B
724 743Right-handed alpha
Helix 30
AD3
B
750 768Right-handed alpha
Helix 31
AD4
B
777 785Right-handed alpha
Helix 32
AD5
B
795 809Right-handed alpha
Helix 33
AD6
B
894 901Right-handed alpha
Helix 34
AD7
B
905 911Right-handed alpha
Helix 35
AD8
B
912 915Right-handed 310
Helix 36
AD9
B
921 931Right-handed alpha
Helix 37
AE1
B
942 957Right-handed alpha
Helix 38
AE2
B
965 982Right-handed alpha
Helix 39
AE3
B
983 988Right-handed 310
Helix 40
AE4
B
989 1002Right-handed alpha
Helix 41
AE5
B
1066 1078Right-handed alpha
Helix 42
AE6
B
1079 1082Right-handed 310
Helix 43
AE7
B
1083 1104Right-handed alpha
Helix 44
AE8
B
1113 1126Right-handed alpha
Helix 45
AE9
B
1130 1150Right-handed alpha
Helix 46
AF1
B
1153 1173Right-handed alpha
Helix 47
AF2
B
1181 1187Right-handed alpha
Helix 48
AF3
B
1187 1197Right-handed alpha
Helix 49
AF4
B
1199 1218Right-handed alpha
Helix 50
AF5
B
1224 1235Right-handed alpha
Helix 51
AF6
B
1243 1256Right-handed alpha
Helix 52
AF7
B
1258 1265Right-handed alpha
Helix 53
AF8
B
1267 1281Right-handed alpha
Helix 54
AF9
B
1290 1299Right-handed alpha
Helix 55
AG1
B
1299 1304Right-handed alpha
Helix 56
AG2
B
1340 1352Right-handed alpha
Helix 57
AG3
B
1365 1376Right-handed alpha
Helix 58
AG4
B
1387 1399Right-handed alpha
Helix 59
AG5
B
1424 1435Right-handed alpha
Helix 60
AG6
B
1436 1437Right-handed 310
Helix 61
AG7
B
1444 1446Right-handed 310
Helix 62
AG8
B
1447 1458Right-handed alpha
Helix 63
AG9
B
1466 1482Right-handed alpha
Helix 64
AH1
B
1489 1504Right-handed alpha
Helix 65
AH2
B
1624 1643Right-handed alpha
Helix 66
AH3
B
1644 1651Right-handed alpha
Helix 67
AH4
B
1652 1675Right-handed alpha
Helix 68
AH5
B
1697 1714Right-handed alpha
Helix 69
AH6
B
1725 1731Right-handed alpha
Helix 70
AH7
B
1732 1746Right-handed alpha
Helix 71
AH8
B
1751 1769Right-handed alpha
Helix 72
AH9
B
1770 1772Right-handed 310
Helix 73
AI1
B
1773 1780Right-handed alpha
Helix 74
AI2
B
1780 1790Right-handed alpha
Helix 75
AI3
B
1791 1794Right-handed 310
Helix 76
AI4
B
1797 1816Right-handed alpha
Helix 77
AI5
A
5 18Right-handed alpha
Helix 78
AI6
A
24 37Right-handed alpha
Helix 79
AI7
A
44 56Right-handed alpha
Helix 80
AI8
A
61 76Right-handed alpha
Helix 81
AI9
A
98 108Right-handed alpha
Helix 82
AJ1
A
115 131Right-handed alpha
Helix 83
AJ2
A
139 156Right-handed alpha
Helix 84
AJ3
A
158 187Right-handed alpha
Helix 85
AJ4
A
246 252Right-handed 310
Helix 86
AJ5
A
296 321Right-handed alpha
Helix 87
AJ6
A
334 354Right-handed alpha
Helix 88
AJ7
A
354 360Right-handed alpha
Helix 89
AJ8
A
376 390Right-handed alpha
Helix 90
AJ9
A
396 414Right-handed alpha
Helix 91
AK1
A
415 417Right-handed 310
Helix 92
AK2
A
418 429Right-handed alpha
Helix 93
AK3
A
429 436Right-handed alpha
Helix 94
AK4
A
440 456Right-handed alpha
Helix 95
AK5
A
458 469Right-handed alpha
Helix 96
AK6
A
477 489Right-handed alpha
Helix 97
AK7
A
496 506Right-handed alpha
Helix 98
AK8
A
542 567Right-handed alpha
Helix 99
AK9
A
634 640Right-handed alpha
Helix 100
AL1
A
642 651Right-handed alpha
Helix 101
AL2
A
660 671Right-handed alpha
Helix 102
AL3
A
675 684Right-handed alpha
Helix 103
AL4
A
687 701Right-handed alpha
Helix 104
AL5
A
707 717Right-handed alpha
Helix 105
AL6
A
724 743Right-handed alpha
Helix 106
AL7
A
750 768Right-handed alpha
Helix 107
AL8
A
777 785Right-handed alpha
Helix 108
AL9
A
795 809Right-handed alpha
Helix 109
AM1
A
894 901Right-handed alpha
Helix 110
AM2
A
905 910Right-handed alpha
Helix 111
AM3
A
911 915Right-handed 310
Helix 112
AM4
A
921 931Right-handed alpha
Helix 113
AM5
A
942 957Right-handed alpha
Helix 114
AM6
A
965 983Right-handed alpha
Helix 115
AM7
A
984 988Right-handed 310
Helix 116
AM8
A
989 1002Right-handed alpha
Helix 117
AM9
A
1066 1078Right-handed alpha
Helix 118
AN1
A
1079 1082Right-handed 310
Helix 119
AN2
A
1083 1104Right-handed alpha
Helix 120
AN3
A
1113 1126Right-handed alpha
Helix 121
AN4
A
1130 1150Right-handed alpha
Helix 122
AN5
A
1153 1173Right-handed alpha
Helix 123
AN6
A
1181 1187Right-handed alpha
Helix 124
AN7
A
1187 1197Right-handed alpha
Helix 125
AN8
A
1199 1218Right-handed alpha
Helix 126
AN9
A
1225 1235Right-handed alpha
Helix 127
AO1
A
1243 1256Right-handed alpha
Helix 128
AO2
A
1258 1265Right-handed alpha
Helix 129
AO3
A
1267 1281Right-handed alpha
Helix 130
AO4
A
1290 1296Right-handed alpha
Helix 131
AO5
A
1299 1304Right-handed alpha
Helix 132
AO6
A
1340 1352Right-handed alpha
Helix 133
AO7
A
1365 1374Right-handed alpha
Helix 134
AO8
A
1374 1379Right-handed alpha
Helix 135
AO9
A
1387 1399Right-handed alpha
Helix 136
AP1
A
1425 1435Right-handed alpha
Helix 137
AP2
A
1445 1458Right-handed alpha
Helix 138
AP3
A
1466 1482Right-handed alpha
Helix 139
AP4
A
1489 1504Right-handed alpha
Helix 140
AP5
A
1624 1643Right-handed alpha
Helix 141
AP6
A
1644 1651Right-handed alpha
Helix 142
AP7
A
1652 1675Right-handed alpha
Helix 143
AP8
A
1697 1714Right-handed alpha
Helix 144
AP9
A
1725 1731Right-handed alpha
Helix 145
AQ1
A
1732 1746Right-handed alpha
Helix 146
AQ2
A
1751 1769Right-handed alpha
Helix 147
AQ3
A
1773 1780Right-handed alpha
Helix 148
AQ4
A
1780 1790Right-handed alpha
Helix 149
AQ5
A
1791 1794Right-handed 310
Helix 150
AQ6
A
1797 1816Right-handed alpha
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There are 4 sheets in PDB entry 8UCQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
136 137first strand
Strand 2
B
268 269anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
364 365first strand
Strand 2
B
374 375anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
136 137first strand
Strand 2
A
268 269anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
364 366first strand
Strand 2
A
373 375anti-parallel
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