Analysis of interatomic Contacts of Structural Units in PDB entry:
8UCS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8UCS entry

There are 10 chains in PDB entry 8UCS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 16THR 60
B
 GLY 11THR 60
C
 LEU 7VAL 259
D
 LYS 3VAL 259
E
 LEU 7VAL 259
F
 LYS 3VAL 259
G
 THR 8GLN 260
H
 VAL 239VAL 326
I
 VAL 239VAL 326
J
 VAL 239VAL 326
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 89 helices in PDB entry 8UCS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 40Right-handed alpha
Helix 2
AA2
A
46 60Right-handed alpha
Helix 3
AA3
B
17 40Right-handed alpha
Helix 4
AA4
B
44 60Right-handed alpha
Helix 5
AA5
C
8 24Right-handed alpha
Helix 6
AA6
C
29 34Right-handed 310
Helix 7
AA7
C
35 54Right-handed alpha
Helix 8
AA8
C
57 72Right-handed alpha
Helix 9
AA9
C
76 95Right-handed alpha
Helix 10
AB1
C
96 98Right-handed 310
Helix 11
AB2
C
99 105Right-handed alpha
Helix 12
AB3
C
110 120Right-handed alpha
Helix 13
AB4
C
123 174Right-handed alpha
Helix 14
AB5
C
177 189Right-handed alpha
Helix 15
AB6
C
189 202Right-handed alpha
Helix 16
AB7
C
202 233Right-handed alpha
Helix 17
AB8
C
236 245Right-handed alpha
Helix 18
AB9
C
249 258Right-handed alpha
Helix 19
AC1
D
6 24Right-handed alpha
Helix 20
AC2
D
29 34Right-handed 310
Helix 21
AC3
D
35 42Right-handed alpha
Helix 22
AC4
D
42 54Right-handed alpha
Helix 23
AC5
D
55 70Right-handed alpha
Helix 24
AC6
D
76 95Right-handed alpha
Helix 25
AC7
D
110 121Right-handed alpha
Helix 26
AC8
D
123 174Right-handed alpha
Helix 27
AC9
D
177 202Right-handed alpha
Helix 28
AD1
D
202 233Right-handed alpha
Helix 29
AD2
D
239 245Right-handed alpha
Helix 30
AD3
D
246 248Right-handed 310
Helix 31
AD4
D
249 258Right-handed alpha
Helix 32
AD5
E
9 24Right-handed alpha
Helix 33
AD6
E
29 34Right-handed 310
Helix 34
AD7
E
35 54Right-handed alpha
Helix 35
AD8
E
55 70Right-handed alpha
Helix 36
AD9
E
76 94Right-handed alpha
Helix 37
AE1
E
100 105Right-handed alpha
Helix 38
AE2
E
110 119Right-handed alpha
Helix 39
AE3
E
123 174Right-handed alpha
Helix 40
AE4
E
180 189Right-handed alpha
Helix 41
AE5
E
189 202Right-handed alpha
Helix 42
AE6
E
202 234Right-handed alpha
Helix 43
AE7
E
236 246Right-handed alpha
Helix 44
AE8
E
249 258Right-handed alpha
Helix 45
AE9
F
6 24Right-handed alpha
Helix 46
AF1
F
29 34Right-handed 310
Helix 47
AF2
F
35 54Right-handed alpha
Helix 48
AF3
F
55 70Right-handed alpha
Helix 49
AF4
F
76 95Right-handed alpha
Helix 50
AF5
F
96 98Right-handed 310
Helix 51
AF6
F
99 105Right-handed alpha
Helix 52
AF7
F
108 121Right-handed alpha
Helix 53
AF8
F
123 174Right-handed alpha
Helix 54
AF9
F
179 202Right-handed alpha
Helix 55
AG1
F
202 234Right-handed alpha
Helix 56
AG2
F
238 245Right-handed alpha
Helix 57
AG3
F
246 248Right-handed 310
Helix 58
AG4
F
249 254Right-handed alpha
Helix 59
AG5
G
9 26Right-handed alpha
Helix 60
AG6
G
29 34Right-handed 310
Helix 61
AG7
G
35 54Right-handed alpha
Helix 62
AG8
G
55 72Right-handed alpha
Helix 63
AG9
G
76 94Right-handed alpha
Helix 64
AH1
G
95 98Right-handed 310
Helix 65
AH2
G
99 105Right-handed alpha
Helix 66
AH3
G
111 120Right-handed alpha
Helix 67
AH4
G
123 174Right-handed alpha
Helix 68
AH5
G
177 179Right-handed 310
Helix 69
AH6
G
180 189Right-handed alpha
Helix 70
AH7
G
189 202Right-handed alpha
Helix 71
AH8
G
202 233Right-handed alpha
Helix 72
AH9
G
236 246Right-handed alpha
Helix 73
AI1
G
249 260Right-handed alpha
Helix 74
AI2
H
247 255Right-handed alpha
Helix 75
AI3
H
259 266Right-handed alpha
Helix 76
AI4
H
271 280Right-handed alpha
Helix 77
AI5
H
283 295Right-handed alpha
Helix 78
AI6
H
304 320Right-handed alpha
Helix 79
AI7
I
239 244Right-handed 310
Helix 80
AI8
I
247 256Right-handed alpha
Helix 81
AI9
I
259 268Right-handed alpha
Helix 82
AJ1
I
271 281Right-handed alpha
Helix 83
AJ2
I
283 296Right-handed alpha
Helix 84
AJ3
I
301 319Right-handed alpha
Helix 85
AJ4
J
247 256Right-handed alpha
Helix 86
AJ5
J
259 268Right-handed alpha
Helix 87
AJ6
J
271 279Right-handed alpha
Helix 88
AJ7
J
283 298Right-handed alpha
Helix 89
AJ8
J
302 319Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8UCS.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
41 43first strand
Strand 2
B
41 43anti-parallel
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