Analysis of interatomic Contacts of Structural Units in PDB entry:
8UD0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8UD0 entry

There are 2 chains in PDB entry 8UD0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 191ASP 253
B
 GLU 192ASP 253
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 8UD0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
196 207Right-handed alpha
Helix 2
AA2
A
208 210Right-handed 310
Helix 3
AA3
A
211 218Right-handed alpha
Helix 4
AA4
A
221 228Right-handed 310
Helix 5
AA5
A
229 236Right-handed alpha
Helix 6
AA6
A
239 252Right-handed alpha
Helix 7
AA7
B
196 206Right-handed alpha
Helix 8
AA8
B
208 210Right-handed 310
Helix 9
AA9
B
211 218Right-handed alpha
Helix 10
AB1
B
221 228Right-handed 310
Helix 11
AB2
B
229 236Right-handed alpha
Helix 12
AB3
B
239 253Right-handed alpha
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There are no sheets in PDB entry 8UD0
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