Analysis of interatomic Contacts of Structural Units in PDB entry:
8UEL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8UEL entry

There are 2 chains in PDB entry 8UEL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1CYS 433
B
 SER 1CYS 433
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 8UEL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
55 59Right-handed 310
Helix 2
AA2
A
61 71Right-handed alpha
Helix 3
AA3
A
71 80Right-handed alpha
Helix 4
AA4
A
85 98Right-handed alpha
Helix 5
AA5
A
106 125Right-handed alpha
Helix 6
AA6
A
128 137Right-handed alpha
Helix 7
AA7
A
155 158Right-handed 310
Helix 8
AA8
A
176 200Right-handed alpha
Helix 9
AA9
A
201 205Right-handed 310
Helix 10
AB1
A
218 233Right-handed alpha
Helix 11
AB2
A
246 249Right-handed 310
Helix 12
AB3
A
274 288Right-handed alpha
Helix 13
AB4
A
301 312Right-handed alpha
Helix 14
AB5
A
325 335Right-handed alpha
Helix 15
AB6
A
344 349Right-handed alpha
Helix 16
AB7
A
350 364Right-handed alpha
Helix 17
AB8
A
380 389Right-handed alpha
Helix 18
AB9
A
401 419Right-handed alpha
Helix 19
AC1
A
420 422Right-handed 310
Helix 20
AC2
A
425 429Right-handed 310
Helix 21
AC3
B
55 59Right-handed 310
Helix 22
AC4
B
61 71Right-handed alpha
Helix 23
AC5
B
71 80Right-handed alpha
Helix 24
AC6
B
85 98Right-handed alpha
Helix 25
AC7
B
106 125Right-handed alpha
Helix 26
AC8
B
128 137Right-handed alpha
Helix 27
AC9
B
176 200Right-handed alpha
Helix 28
AD1
B
201 205Right-handed 310
Helix 29
AD2
B
218 233Right-handed alpha
Helix 30
AD3
B
246 250Right-handed 310
Helix 31
AD4
B
267 269Right-handed 310
Helix 32
AD5
B
274 288Right-handed alpha
Helix 33
AD6
B
301 312Right-handed alpha
Helix 34
AD7
B
325 336Right-handed alpha
Helix 35
AD8
B
344 349Right-handed alpha
Helix 36
AD9
B
350 364Right-handed alpha
Helix 37
AE1
B
380 389Right-handed alpha
Helix 38
AE2
B
401 419Right-handed alpha
Helix 39
AE3
B
420 422Right-handed 310
Helix 40
AE4
B
425 429Right-handed 310
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There are 6 sheets in PDB entry 8UEL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 11first strand
Strand 2
A
17 25anti-parallel
Strand 3
A
28 33anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
146 147first strand
Strand 2
A
393 395parallel
Strand 3
A
367 371parallel
Strand 4
A
340 343parallel
Strand 5
A
315 318parallel
Strand 6
A
290 294parallel
Strand 7
A
240 244parallel
Strand 8
A
166 170anti-parallel
Strand 9
A
149 153anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
251 253first strand
Strand 2
A
256 258anti-parallel
Strand 3
A
271 273anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
4 11first strand
Strand 2
B
17 25anti-parallel
Strand 3
B
28 33anti-parallel
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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
146 147first strand
Strand 2
B
393 395parallel
Strand 3
B
367 371parallel
Strand 4
B
340 343parallel
Strand 5
B
315 318parallel
Strand 6
B
290 294parallel
Strand 7
B
240 244parallel
Strand 8
B
166 170anti-parallel
Strand 9
B
149 153anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
256 258first strand
Strand 2
B
271 273anti-parallel
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