Analysis of interatomic Contacts of Structural Units in PDB entry:
8UG4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8UG4 entry

There are 2 chains in PDB entry 8UG4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 47LYS 583
B
 HIS 47LYS 583
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 8UG4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
57 86Right-handed alpha
Helix 2
AA2
A
93 119Right-handed alpha
Helix 3
AA3
A
122 136Right-handed alpha
Helix 4
AA4
A
158 186Right-handed alpha
Helix 5
AA5
A
190 213Right-handed alpha
Helix 6
AA6
A
222 268Right-handed alpha
Helix 7
AA7
A
307 312Right-handed alpha
Helix 8
AA8
A
314 340Right-handed alpha
Helix 9
AA9
A
366 389Right-handed alpha
Helix 10
AB1
A
389 395Right-handed alpha
Helix 11
AB2
A
395 425Right-handed alpha
Helix 12
AB3
A
436 467Right-handed alpha
Helix 13
AB4
A
474 499Right-handed alpha
Helix 14
AB5
A
504 510Right-handed alpha
Helix 15
AB6
A
513 535Right-handed alpha
Helix 16
AB7
A
544 549Right-handed 310
Helix 17
AB8
A
563 579Right-handed alpha
Helix 18
AB9
B
57 86Right-handed alpha
Helix 19
AC1
B
93 119Right-handed alpha
Helix 20
AC2
B
122 136Right-handed alpha
Helix 21
AC3
B
158 186Right-handed alpha
Helix 22
AC4
B
190 213Right-handed alpha
Helix 23
AC5
B
222 268Right-handed alpha
Helix 24
AC6
B
307 312Right-handed alpha
Helix 25
AC7
B
314 340Right-handed alpha
Helix 26
AC8
B
366 389Right-handed alpha
Helix 27
AC9
B
389 395Right-handed alpha
Helix 28
AD1
B
395 425Right-handed alpha
Helix 29
AD2
B
436 467Right-handed alpha
Helix 30
AD3
B
474 499Right-handed alpha
Helix 31
AD4
B
504 510Right-handed alpha
Helix 32
AD5
B
513 535Right-handed alpha
Helix 33
AD6
B
544 549Right-handed 310
Helix 34
AD7
B
563 579Right-handed alpha
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There are 2 sheets in PDB entry 8UG4. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
428 429first strand
Strand 2
A
500 501anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
428 429first strand
Strand 2
B
500 501anti-parallel
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