Analysis of interatomic Contacts of Structural Units in PDB entry:
8UG5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8UG5 entry

There are 2 chains in PDB entry 8UG5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 50SER 581
B
 TYR 50SER 581
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 8UG5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
53 56Right-handed 310
Helix 2
AA2
A
57 86Right-handed alpha
Helix 3
AA3
A
95 119Right-handed alpha
Helix 4
AA4
A
122 135Right-handed alpha
Helix 5
AA5
A
158 185Right-handed alpha
Helix 6
AA6
A
190 213Right-handed alpha
Helix 7
AA7
A
224 244Right-handed alpha
Helix 8
AA8
A
313 340Right-handed alpha
Helix 9
AA9
A
398 424Right-handed alpha
Helix 10
AB1
A
425 427Right-handed 310
Helix 11
AB2
A
435 464Right-handed alpha
Helix 12
AB3
A
475 498Right-handed alpha
Helix 13
AB4
A
504 511Right-handed alpha
Helix 14
AB5
A
513 533Right-handed alpha
Helix 15
AB6
A
551 579Right-handed alpha
Helix 16
AB7
B
53 56Right-handed 310
Helix 17
AB8
B
57 86Right-handed alpha
Helix 18
AB9
B
95 119Right-handed alpha
Helix 19
AC1
B
122 135Right-handed alpha
Helix 20
AC2
B
158 185Right-handed alpha
Helix 21
AC3
B
190 213Right-handed alpha
Helix 22
AC4
B
224 244Right-handed alpha
Helix 23
AC5
B
313 340Right-handed alpha
Helix 24
AC6
B
398 424Right-handed alpha
Helix 25
AC7
B
425 427Right-handed 310
Helix 26
AC8
B
435 464Right-handed alpha
Helix 27
AC9
B
475 498Right-handed alpha
Helix 28
AD1
B
504 511Right-handed alpha
Helix 29
AD2
B
513 533Right-handed alpha
Helix 30
AD3
B
551 579Right-handed alpha
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There are 2 sheets in PDB entry 8UG5. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
428 429first strand
Strand 2
A
500 501anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
428 429first strand
Strand 2
B
500 501anti-parallel
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