Analysis of interatomic Contacts of Structural Units in PDB entry:
8UG6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8UG6 entry

There are 2 chains in PDB entry 8UG6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 28LEU 562
B
 GLY 28LEU 562
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 8UG6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
28 50Right-handed alpha
Helix 2
AA2
A
59 84Right-handed alpha
Helix 3
AA3
A
100 125Right-handed alpha
Helix 4
AA4
A
134 157Right-handed alpha
Helix 5
AA5
A
165 195Right-handed alpha
Helix 6
AA6
A
233 244Right-handed alpha
Helix 7
AA7
A
244 265Right-handed alpha
Helix 8
AA8
A
292 309Right-handed alpha
Helix 9
AA9
A
327 354Right-handed alpha
Helix 10
AB1
A
365 377Right-handed alpha
Helix 11
AB2
A
377 394Right-handed alpha
Helix 12
AB3
A
398 428Right-handed alpha
Helix 13
AB4
A
490 515Right-handed alpha
Helix 14
AB5
A
523 530Right-handed alpha
Helix 15
AB6
A
530 562Right-handed alpha
Helix 16
AB7
B
29 50Right-handed alpha
Helix 17
AB8
B
59 84Right-handed alpha
Helix 18
AB9
B
100 125Right-handed alpha
Helix 19
AC1
B
134 157Right-handed alpha
Helix 20
AC2
B
165 195Right-handed alpha
Helix 21
AC3
B
233 244Right-handed alpha
Helix 22
AC4
B
244 265Right-handed alpha
Helix 23
AC5
B
292 309Right-handed alpha
Helix 24
AC6
B
327 354Right-handed alpha
Helix 25
AC7
B
365 377Right-handed alpha
Helix 26
AC8
B
377 394Right-handed alpha
Helix 27
AC9
B
398 428Right-handed alpha
Helix 28
AD1
B
490 515Right-handed alpha
Helix 29
AD2
B
523 530Right-handed alpha
Helix 30
AD3
B
530 562Right-handed alpha
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There are no sheets in PDB entry 8UG6
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il