Analysis of interatomic Contacts of Structural Units in PDB entry:
8UGS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8UGS entry

There are 4 chains in PDB entry 8UGS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 7GLY 822
B
 GLN 7GLU 822
C
 SER 12ILE 86
D
 ARG 11ILE 86
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 80 helices in PDB entry 8UGS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 16Right-handed alpha
Helix 2
AA2
A
16 28Right-handed alpha
Helix 3
AA3
A
28 38Right-handed alpha
Helix 4
AA4
A
53 67Right-handed alpha
Helix 5
AA5
A
73 90Right-handed alpha
Helix 6
AA6
A
120 124Right-handed 310
Helix 7
AA7
A
127 131Right-handed 310
Helix 8
AA8
A
139 148Right-handed alpha
Helix 9
AA9
A
164 171Right-handed alpha
Helix 10
AB1
A
204 250Right-handed alpha
Helix 11
AB2
A
254 266Right-handed alpha
Helix 12
AB3
A
266 271Right-handed alpha
Helix 13
AB4
A
287 296Right-handed alpha
Helix 14
AB5
A
345 354Right-handed alpha
Helix 15
AB6
A
362 365Right-handed 310
Helix 16
AB7
A
413 430Right-handed alpha
Helix 17
AB8
A
431 459Right-handed alpha
Helix 18
AB9
A
463 468Right-handed 310
Helix 19
AC1
A
483 495Right-handed alpha
Helix 20
AC2
A
497 502Right-handed alpha
Helix 21
AC3
A
514 529Right-handed alpha
Helix 22
AC4
A
530 536Right-handed alpha
Helix 23
AC5
A
538 553Right-handed alpha
Helix 24
AC6
A
560 578Right-handed alpha
Helix 25
AC7
A
579 584Right-handed 310
Helix 26
AC8
A
585 599Right-handed alpha
Helix 27
AC9
A
607 614Right-handed alpha
Helix 28
AD1
A
616 622Right-handed alpha
Helix 29
AD2
A
625 641Right-handed alpha
Helix 30
AD3
A
651 669Right-handed alpha
Helix 31
AD4
A
670 677Right-handed alpha
Helix 32
AD5
A
678 691Right-handed alpha
Helix 33
AD6
A
693 704Right-handed alpha
Helix 34
AD7
A
705 721Right-handed alpha
Helix 35
AD8
A
727 753Right-handed alpha
Helix 36
AD9
A
765 767Right-handed 310
Helix 37
AE1
A
768 780Right-handed alpha
Helix 38
AE2
A
780 792Right-handed alpha
Helix 39
AE3
A
795 821Right-handed alpha
Helix 40
AE4
B
8 15Right-handed alpha
Helix 41
AE5
B
15 24Right-handed alpha
Helix 42
AE6
B
47 68Right-handed alpha
Helix 43
AE7
B
71 88Right-handed alpha
Helix 44
AE8
B
118 123Right-handed alpha
Helix 45
AE9
B
125 129Right-handed 310
Helix 46
AF1
B
137 146Right-handed alpha
Helix 47
AF2
B
162 168Right-handed alpha
Helix 48
AF3
B
202 213Right-handed alpha
Helix 49
AF4
B
213 247Right-handed alpha
Helix 50
AF5
B
252 264Right-handed alpha
Helix 51
AF6
B
264 269Right-handed alpha
Helix 52
AF7
B
285 295Right-handed alpha
Helix 53
AF8
B
337 342Right-handed alpha
Helix 54
AF9
B
343 352Right-handed alpha
Helix 55
AG1
B
360 363Right-handed 310
Helix 56
AG2
B
411 428Right-handed alpha
Helix 57
AG3
B
428 457Right-handed alpha
Helix 58
AG4
B
462 466Right-handed 310
Helix 59
AG5
B
481 493Right-handed alpha
Helix 60
AG6
B
512 527Right-handed alpha
Helix 61
AG7
B
528 533Right-handed alpha
Helix 62
AG8
B
536 551Right-handed alpha
Helix 63
AG9
B
559 575Right-handed alpha
Helix 64
AH1
B
577 582Right-handed 310
Helix 65
AH2
B
583 596Right-handed alpha
Helix 66
AH3
B
605 613Right-handed alpha
Helix 67
AH4
B
614 621Right-handed alpha
Helix 68
AH5
B
623 639Right-handed alpha
Helix 69
AH6
B
640 643Right-handed 310
Helix 70
AH7
B
649 667Right-handed alpha
Helix 71
AH8
B
668 689Right-handed alpha
Helix 72
AH9
B
691 700Right-handed alpha
Helix 73
AI1
B
702 719Right-handed alpha
Helix 74
AI2
B
719 724Right-handed alpha
Helix 75
AI3
B
725 750Right-handed alpha
Helix 76
AI4
B
763 765Right-handed 310
Helix 77
AI5
B
766 778Right-handed alpha
Helix 78
AI6
B
778 790Right-handed alpha
Helix 79
AI7
B
793 822Right-handed alpha
Helix 80
AI8
D
81 85Right-handed 310
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There are 4 sheets in PDB entry 8UGS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
134 135first strand
Strand 2
A
106 115anti-parallel
Strand 3
A
94 101anti-parallel
Strand 4
A
187 194anti-parallel
Strand 5
A
177 184anti-parallel
Strand 6
A
151 153anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
330 333first strand
Strand 2
A
315 322anti-parallel
Strand 3
A
274 280anti-parallel
Strand 4
A
399 403anti-parallel
Strand 5
A
384 389anti-parallel
Strand 6
A
357 360anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
132 133first strand
Strand 2
B
103 113anti-parallel
Strand 3
B
89 100anti-parallel
Strand 4
B
185 195anti-parallel
Strand 5
B
175 182anti-parallel
Strand 6
B
149 151anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
328 331first strand
Strand 2
B
313 320anti-parallel
Strand 3
B
270 278anti-parallel
Strand 4
B
395 404anti-parallel
Strand 5
B
382 389anti-parallel
Strand 6
B
355 358anti-parallel
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