Analysis of interatomic Contacts of Structural Units in PDB entry:
8UH1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8UH1 entry

There are 2 chains in PDB entry 8UH1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 7ILE 178
B
 SER 79GLY 118
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 8UH1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
47 57Right-handed alpha
Helix 2
AA2
A
59 63Right-handed 310
Helix 3
AA3
A
79 83Right-handed 310
Helix 4
AA4
A
95 111Right-handed alpha
Helix 5
AA5
A
115 120Right-handed alpha
Helix 6
AA6
A
150 152Right-handed 310
Helix 7
AA7
A
153 165Right-handed alpha
Helix 8
AA8
B
88 94Right-handed alpha
Helix 9
AA9
B
95 98Right-handed 310
Helix 10
AB1
B
103 116Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8UH1.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 46first strand
Strand 2
A
11 21anti-parallel
Strand 3
A
68 73anti-parallel
Strand 4
A
125 132anti-parallel
Strand 5
A
142 148anti-parallel
Strand 6
A
87 93anti-parallel
Strand 7
A
172 177anti-parallel
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