Analysis of interatomic Contacts of Structural Units in PDB entry:
8UH2

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8UH2 entry

There are 4 chains in PDB entry 8UH2 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
C	ALA 1	GLU 116
D	ALA 1	GLU 116
A	SER 1	GLN 642
B	GLU 731	THR 1166

There are 72 helices in PDB entry 8UH2. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	C	2	14	Right-handed alpha
Helix 2	AA2	C	22	38	Right-handed alpha
Helix 3	AA3	C	39	46	Right-handed alpha
Helix 4	AA4	C	55	79	Right-handed alpha
Helix 5	AA5	C	88	111	Right-handed alpha
Helix 6	AA6	D	2	12	Right-handed alpha
Helix 7	AA7	D	22	37	Right-handed alpha
Helix 8	AA8	D	38	47	Right-handed alpha
Helix 9	AA9	D	55	79	Right-handed alpha
Helix 10	AB1	D	88	110	Right-handed alpha
Helix 11	AB2	D	111	113	Right-handed 310
Helix 12	AB3	A	55	59	Right-handed 310
Helix 13	AB4	A	263	266	Right-handed 310
Helix 14	AB5	A	281	289	Right-handed alpha
Helix 15	AB6	A	294	298	Right-handed 310
Helix 16	AB7	A	410	414	Right-handed 310
Helix 17	AB8	A	458	462	Right-handed 310
Helix 18	AB9	A	500	504	Right-handed 310
Helix 19	AC1	A	578	584	Right-handed alpha
Helix 20	AC2	A	590	600	Right-handed alpha
Helix 21	AC3	A	612	621	Right-handed alpha
Helix 22	AC4	B	977	981	Right-handed 310
Helix 23	AC5	B	988	1010	Right-handed alpha
Helix 24	AC6	B	1011	1016	Right-handed alpha
Helix 25	AC7	B	1018	1037	Right-handed alpha
Helix 26	AC8	B	1053	1068	Right-handed alpha
Helix 27	AC9	B	1074	1089	Right-handed alpha
Helix 28	AD1	B	1108	1113	Right-handed 310
Helix 29	AD2	B	1116	1132	Right-handed alpha
Helix 30	AD3	B	1142	1157	Right-handed alpha
Helix 31	AD4	B	1163	1178	Right-handed alpha
Helix 32	AD5	B	1182	1191	Right-handed alpha
Helix 33	AD6	B	1203	1222	Right-handed alpha
Helix 34	AD7	B	1226	1238	Right-handed alpha
Helix 35	AD8	B	1246	1261	Right-handed alpha
Helix 36	AD9	B	1292	1294	Right-handed 310
Helix 37	AE1	B	1392	1402	Right-handed alpha
Helix 38	AE2	B	1408	1415	Right-handed alpha
Helix 39	AE3	B	1416	1419	Right-handed 310
Helix 40	AE4	B	1506	1514	Right-handed alpha
Helix 41	AE5	B	1567	1572	Right-handed alpha
Helix 42	AE6	B	1585	1587	Right-handed 310
Helix 43	AE7	B	1613	1616	Right-handed 310
Helix 44	AE8	B	1617	1637	Right-handed alpha
Helix 45	AE9	G	55	59	Right-handed 310
Helix 46	AF1	G	71	76	Right-handed alpha
Helix 47	AF2	G	263	266	Right-handed 310
Helix 48	AF3	G	281	289	Right-handed alpha
Helix 49	AF4	G	294	298	Right-handed 310
Helix 50	AF5	G	461	465	Right-handed 310
Helix 51	AF6	G	500	504	Right-handed 310
Helix 52	AF7	G	578	584	Right-handed alpha
Helix 53	AF8	G	590	601	Right-handed alpha
Helix 54	AF9	G	612	621	Right-handed alpha
Helix 55	AG1	H	988	1010	Right-handed alpha
Helix 56	AG2	H	1011	1016	Right-handed 310
Helix 57	AG3	H	1017	1037	Right-handed alpha
Helix 58	AG4	H	1053	1068	Right-handed alpha
Helix 59	AG5	H	1074	1088	Right-handed alpha
Helix 60	AG6	H	1104	1113	Right-handed 310
Helix 61	AG7	H	1116	1132	Right-handed alpha
Helix 62	AG8	H	1142	1157	Right-handed alpha
Helix 63	AG9	H	1163	1177	Right-handed alpha
Helix 64	AH1	H	1182	1192	Right-handed alpha
Helix 65	AH2	H	1203	1221	Right-handed alpha
Helix 66	AH3	H	1226	1238	Right-handed alpha
Helix 67	AH4	H	1247	1263	Right-handed alpha
Helix 68	AH5	H	1392	1401	Right-handed alpha
Helix 69	AH6	H	1408	1413	Right-handed alpha
Helix 70	AH7	H	1506	1514	Right-handed alpha
Helix 71	AH8	H	1566	1572	Right-handed alpha
Helix 72	AH9	H	1617	1638	Right-handed alpha

There are 49 sheets in PDB entry 8UH2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	61	66	first strand
Strand 2	A	18	23	anti-parallel
Strand 3	A	5	7	anti-parallel
Strand 4	A	624	626	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	11	12	first strand
Strand 2	A	93	101	parallel
Strand 3	A	82	90	anti-parallel
Strand 4	A	31	40	anti-parallel
Strand 5	A	52	54	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	106	112	first strand
Strand 2	A	122	131	anti-parallel
Strand 3	A	169	172	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	116	117	first strand
Strand 2	A	196	202	parallel
Strand 3	A	180	188	anti-parallel
Strand 4	A	140	146	anti-parallel
Strand 5	A	152	159	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	210	216	first strand
Strand 2	A	229	237	anti-parallel
Strand 3	A	276	280	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	221	222	first strand
Strand 2	A	316	327	parallel
Strand 3	A	301	310	anti-parallel
Strand 4	A	245	255	anti-parallel
Strand 5	A	258	261	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	221	222	first strand
Strand 2	A	316	327	parallel
Strand 3	A	301	310	anti-parallel
Strand 4	A	245	255	anti-parallel
Strand 5	A	267	268	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	332	334	first strand
Strand 2	A	348	355	anti-parallel
Strand 3	A	384	389	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	341	342	first strand
Strand 2	A	416	423	parallel
Strand 3	A	398	404	anti-parallel
Strand 4	A	367	369	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	433	437	first strand
Strand 2	A	449	456	anti-parallel
Strand 3	A	494	497	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	477	482	first strand
Strand 2	A	469	474	anti-parallel
Strand 3	A	506	517	anti-parallel
Strand 4	A	521	532	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	543	545	first strand
Strand 2	A	558	563	anti-parallel
Strand 3	B	767	772	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	748	755	first strand
Strand 2	A	570	577	anti-parallel
Strand 3	B	779	787	anti-parallel
Strand 4	B	793	795	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	748	755	first strand
Strand 2	A	570	577	anti-parallel
Strand 3	B	779	787	anti-parallel
Strand 4	B	799	802	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	807	812	first strand
Strand 2	B	823	831	anti-parallel
Strand 3	B	870	878	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	816	818	first strand
Strand 2	B	900	910	parallel
Strand 3	B	884	893	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	841	844	first strand
Strand 2	B	860	863	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	914	916	first strand
Strand 2	B	1318	1328	anti-parallel
Strand 3	B	919	925	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	914	916	first strand
Strand 2	B	1318	1328	anti-parallel
Strand 3	B	955	962	anti-parallel
Strand 4	B	1298	1302	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	936	940	first strand
Strand 2	B	1308	1313	anti-parallel
Strand 3	B	1271	1277	anti-parallel
Strand 4	B	1285	1290	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1342	1347	first strand
Strand 2	B	1361	1367	anti-parallel
Strand 3	B	1436	1443	anti-parallel
Strand 4	B	1389	1391	anti-parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1405	1406	first strand
Strand 2	B	1421	1426	anti-parallel
Strand 3	B	1379	1384	anti-parallel
Strand 4	B	1454	1459	anti-parallel
Strand 5	B	1467	1469	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1482	1485	first strand
Strand 2	B	1488	1491	anti-parallel

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There are 6 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1546	1548	first strand
Strand 2	B	1521	1532	anti-parallel
Strand 3	B	1536	1542	anti-parallel
Strand 4	B	1559	1565	anti-parallel
Strand 5	B	1597	1599	parallel
Strand 6	B	1589	1590	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1546	1548	first strand
Strand 2	B	1521	1532	anti-parallel
Strand 3	B	1579	1584	anti-parallel
Strand 4	B	1605	1609	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	61	66	first strand
Strand 2	G	18	25	anti-parallel
Strand 3	G	3	9	anti-parallel
Strand 4	G	622	626	anti-parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	11	12	first strand
Strand 2	G	93	101	parallel
Strand 3	G	82	90	anti-parallel
Strand 4	G	31	40	anti-parallel
Strand 5	G	52	54	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	107	112	first strand
Strand 2	G	122	130	anti-parallel
Strand 3	G	166	172	anti-parallel

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There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	116	117	first strand
Strand 2	G	196	202	parallel
Strand 3	G	180	188	anti-parallel
Strand 4	G	140	146	anti-parallel
Strand 5	G	152	159	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	210	216	first strand
Strand 2	G	229	237	anti-parallel
Strand 3	G	276	280	anti-parallel

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There are 5 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	221	222	first strand
Strand 2	G	316	327	parallel
Strand 3	G	301	310	anti-parallel
Strand 4	G	245	255	anti-parallel
Strand 5	G	258	261	anti-parallel

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There are 5 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	221	222	first strand
Strand 2	G	316	327	parallel
Strand 3	G	301	310	anti-parallel
Strand 4	G	245	255	anti-parallel
Strand 5	G	267	271	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	332	334	first strand
Strand 2	G	348	355	anti-parallel
Strand 3	G	384	389	anti-parallel

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There are 5 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	341	342	first strand
Strand 2	G	416	423	parallel
Strand 3	G	398	404	anti-parallel
Strand 4	G	366	369	anti-parallel
Strand 5	G	376	378	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	433	438	first strand
Strand 2	G	448	456	anti-parallel
Strand 3	G	494	498	anti-parallel

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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	469	471	first strand
Strand 2	G	506	517	anti-parallel
Strand 3	G	521	532	anti-parallel

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There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	543	545	first strand
Strand 2	G	558	563	anti-parallel
Strand 3	H	767	772	anti-parallel

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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	748	755	first strand
Strand 2	G	570	576	anti-parallel
Strand 3	H	779	787	anti-parallel
Strand 4	H	793	795	anti-parallel

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There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	748	755	first strand
Strand 2	G	570	576	anti-parallel
Strand 3	H	779	787	anti-parallel
Strand 4	H	799	802	anti-parallel

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There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	809	812	first strand
Strand 2	H	823	829	anti-parallel
Strand 3	H	872	878	anti-parallel

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There are 5 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	816	818	first strand
Strand 2	H	900	910	parallel
Strand 3	H	884	893	anti-parallel
Strand 4	H	842	844	anti-parallel
Strand 5	H	860	862	anti-parallel

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There are 3 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	914	916	first strand
Strand 2	H	1318	1328	anti-parallel
Strand 3	H	919	925	anti-parallel

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There are 4 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	914	916	first strand
Strand 2	H	1318	1328	anti-parallel
Strand 3	H	955	961	anti-parallel
Strand 4	H	1298	1302	anti-parallel

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There are 4 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	935	940	first strand
Strand 2	H	1308	1313	anti-parallel
Strand 3	H	1271	1277	anti-parallel
Strand 4	H	1285	1290	anti-parallel

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There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	1038	1039	first strand
Strand 2	H	1043	1044	anti-parallel

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There are 4 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	1340	1347	first strand
Strand 2	H	1361	1369	anti-parallel
Strand 3	H	1436	1443	anti-parallel
Strand 4	H	1389	1391	anti-parallel

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There are 5 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	1405	1406	first strand
Strand 2	H	1424	1426	anti-parallel
Strand 3	H	1379	1384	anti-parallel
Strand 4	H	1454	1459	anti-parallel
Strand 5	H	1467	1469	anti-parallel

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There are 2 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	1482	1484	first strand
Strand 2	H	1489	1491	anti-parallel

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There are 7 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	1589	1590	first strand
Strand 2	H	1597	1599	anti-parallel
Strand 3	H	1559	1565	parallel
Strand 4	H	1536	1548	anti-parallel
Strand 5	H	1521	1532	anti-parallel
Strand 6	H	1579	1584	anti-parallel
Strand 7	H	1606	1609	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8UH2

Analysis of interatomic Contacts of Structural Units in PDB entry:
8UH2