Analysis of interatomic Contacts of Structural Units in PDB entry:
8UH7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8UH7 entry

There are 10 chains in PDB entry 8UH7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 2	TRP 187
B	MET 1	LYS 319
C	SER 0	LYS 319
D	MET 1	LYS 319
E	ILE 2	LYS 319
F	MSE 7001	PHE 7228
G	MSE 5001	PHE 5228
H	MSE 6001	PHE 6228
I	T 7	C 30
J	G 1	A 20

There are105 helices in PDB entry 8UH7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	11	20	Right-handed alpha
Helix 2	AA2	A	21	31	Right-handed alpha
Helix 3	AA3	A	40	50	Right-handed alpha
Helix 4	AA4	A	61	70	Right-handed alpha
Helix 5	AA5	A	71	74	Right-handed 310
Helix 6	AA6	A	75	85	Right-handed alpha
Helix 7	AA7	A	90	102	Right-handed alpha
Helix 8	AA8	A	117	132	Right-handed alpha
Helix 9	AA9	A	134	147	Right-handed alpha
Helix 10	AB1	A	150	159	Right-handed alpha
Helix 11	AB2	A	160	162	Right-handed 310
Helix 12	AB3	A	163	171	Right-handed alpha
Helix 13	AB4	A	175	185	Right-handed alpha
Helix 14	AB5	B	10	15	Right-handed alpha
Helix 15	AB6	B	26	40	Right-handed alpha
Helix 16	AB7	B	55	68	Right-handed alpha
Helix 17	AB8	B	77	79	Right-handed 310
Helix 18	AB9	B	80	86	Right-handed alpha
Helix 19	AC1	B	86	94	Right-handed alpha
Helix 20	AC2	B	111	113	Right-handed 310
Helix 21	AC3	B	114	126	Right-handed alpha
Helix 22	AC4	B	140	144	Right-handed 310
Helix 23	AC5	B	145	152	Right-handed alpha
Helix 24	AC6	B	161	184	Right-handed alpha
Helix 25	AC7	B	190	200	Right-handed alpha
Helix 26	AC8	B	203	215	Right-handed alpha
Helix 27	AC9	B	221	229	Right-handed alpha
Helix 28	AD1	B	235	245	Right-handed alpha
Helix 29	AD2	B	246	258	Right-handed alpha
Helix 30	AD3	B	260	274	Right-handed alpha
Helix 31	AD4	B	277	294	Right-handed alpha
Helix 32	AD5	B	300	316	Right-handed alpha
Helix 33	AD6	C	10	15	Right-handed alpha
Helix 34	AD7	C	26	40	Right-handed alpha
Helix 35	AD8	C	55	68	Right-handed alpha
Helix 36	AD9	C	77	79	Right-handed 310
Helix 37	AE1	C	80	86	Right-handed alpha
Helix 38	AE2	C	86	94	Right-handed alpha
Helix 39	AE3	C	111	113	Right-handed 310
Helix 40	AE4	C	114	128	Right-handed alpha
Helix 41	AE5	C	140	144	Right-handed 310
Helix 42	AE6	C	145	152	Right-handed alpha
Helix 43	AE7	C	161	184	Right-handed alpha
Helix 44	AE8	C	189	201	Right-handed alpha
Helix 45	AE9	C	203	214	Right-handed alpha
Helix 46	AF1	C	221	229	Right-handed alpha
Helix 47	AF2	C	235	244	Right-handed alpha
Helix 48	AF3	C	246	258	Right-handed alpha
Helix 49	AF4	C	260	275	Right-handed alpha
Helix 50	AF5	C	277	294	Right-handed alpha
Helix 51	AF6	C	295	298	Right-handed 310
Helix 52	AF7	C	300	316	Right-handed alpha
Helix 53	AF8	D	10	15	Right-handed alpha
Helix 54	AF9	D	26	40	Right-handed alpha
Helix 55	AG1	D	55	68	Right-handed alpha
Helix 56	AG2	D	77	79	Right-handed 310
Helix 57	AG3	D	80	86	Right-handed alpha
Helix 58	AG4	D	86	94	Right-handed alpha
Helix 59	AG5	D	111	113	Right-handed 310
Helix 60	AG6	D	114	128	Right-handed alpha
Helix 61	AG7	D	140	144	Right-handed 310
Helix 62	AG8	D	145	151	Right-handed alpha
Helix 63	AG9	D	161	184	Right-handed alpha
Helix 64	AH1	D	189	200	Right-handed alpha
Helix 65	AH2	D	203	215	Right-handed alpha
Helix 66	AH3	D	221	229	Right-handed alpha
Helix 67	AH4	D	235	244	Right-handed alpha
Helix 68	AH5	D	246	258	Right-handed alpha
Helix 69	AH6	D	260	273	Right-handed alpha
Helix 70	AH7	D	277	279	Right-handed 310
Helix 71	AH8	D	280	294	Right-handed alpha
Helix 72	AH9	D	295	298	Right-handed 310
Helix 73	AI1	D	300	316	Right-handed alpha
Helix 74	AI2	E	10	15	Right-handed alpha
Helix 75	AI3	E	26	39	Right-handed alpha
Helix 76	AI4	E	55	68	Right-handed alpha
Helix 77	AI5	E	77	79	Right-handed 310
Helix 78	AI6	E	80	86	Right-handed alpha
Helix 79	AI7	E	86	94	Right-handed alpha
Helix 80	AI8	E	114	128	Right-handed alpha
Helix 81	AI9	E	140	144	Right-handed 310
Helix 82	AJ1	E	145	152	Right-handed alpha
Helix 83	AJ2	E	161	184	Right-handed alpha
Helix 84	AJ3	E	189	201	Right-handed alpha
Helix 85	AJ4	E	203	215	Right-handed alpha
Helix 86	AJ5	E	235	244	Right-handed alpha
Helix 87	AJ6	E	246	258	Right-handed alpha
Helix 88	AJ7	E	260	276	Right-handed alpha
Helix 89	AJ8	E	277	294	Right-handed alpha
Helix 90	AJ9	E	300	316	Right-handed alpha
Helix 91	AK1	F	7004	7015	Right-handed alpha
Helix 92	AK2	F	7056	7067	Right-handed alpha
Helix 93	AK3	F	7096	7100	Right-handed 310
Helix 94	AK4	F	7119	7134	Right-handed alpha
Helix 95	AK5	F	7185	7187	Right-handed 310
Helix 96	AK6	G	5004	5016	Right-handed alpha
Helix 97	AK7	G	5056	5066	Right-handed alpha
Helix 98	AK8	G	5096	5100	Right-handed 310
Helix 99	AK9	G	5119	5134	Right-handed alpha
Helix 100	AL1	G	5185	5187	Right-handed 310
Helix 101	AL2	H	6004	6015	Right-handed alpha
Helix 102	AL3	H	6056	6067	Right-handed alpha
Helix 103	AL4	H	6096	6100	Right-handed 310
Helix 104	AL5	H	6119	6134	Right-handed alpha
Helix 105	AL6	H	6185	6187	Right-handed 310

There are 17 sheets in PDB entry 8UH7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	70	75	first strand
Strand 2	B	102	107	parallel
Strand 3	B	132	138	parallel
Strand 4	B	45	48	parallel
Strand 5	B	153	156	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	186	187	first strand
Strand 2	B	219	220	parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	70	75	first strand
Strand 2	C	102	107	parallel
Strand 3	C	132	138	parallel
Strand 4	C	45	48	parallel
Strand 5	C	153	156	parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	70	75	first strand
Strand 2	D	102	107	parallel
Strand 3	D	132	138	parallel
Strand 4	D	45	48	parallel
Strand 5	D	153	156	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	186	187	first strand
Strand 2	D	219	220	parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	70	75	first strand
Strand 2	E	102	107	parallel
Strand 3	E	132	138	parallel
Strand 4	E	45	48	parallel
Strand 5	E	153	156	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	186	187	first strand
Strand 2	E	219	220	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	7021	7023	first strand
Strand 2	F	7052	7054	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	7026	7032	first strand
Strand 2	F	7038	7048	anti-parallel
Strand 3	F	7214	7219	anti-parallel
Strand 4	F	7205	7210	anti-parallel
Strand 5	F	7194	7200	anti-parallel
Strand 6	F	7114	7118	anti-parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	7072	7075	first strand
Strand 2	F	7081	7084	anti-parallel
Strand 3	F	7088	7092	anti-parallel
Strand 4	G	5165	5171	anti-parallel
Strand 5	G	5146	5152	anti-parallel
Strand 6	G	5137	5143	anti-parallel
Strand 7	G	5179	5183	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	7165	7171	first strand
Strand 2	F	7146	7151	anti-parallel
Strand 3	F	7137	7142	anti-parallel
Strand 4	F	7180	7183	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	5021	5023	first strand
Strand 2	G	5052	5054	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	5026	5032	first strand
Strand 2	G	5038	5048	anti-parallel
Strand 3	G	5214	5218	anti-parallel
Strand 4	G	5204	5210	anti-parallel
Strand 5	G	5194	5201	anti-parallel
Strand 6	G	5114	5118	anti-parallel

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There are 8 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	5072	5075	first strand
Strand 2	G	5081	5084	anti-parallel
Strand 3	G	5088	5092	anti-parallel
Strand 4	H	6165	6171	anti-parallel
Strand 5	H	6146	6152	anti-parallel
Strand 6	H	6137	6143	anti-parallel
Strand 7	H	6178	6183	anti-parallel
Strand 8	H	6225	6226	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	6021	6023	first strand
Strand 2	H	6052	6054	anti-parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	6026	6032	first strand
Strand 2	H	6038	6048	anti-parallel
Strand 3	H	6215	6218	anti-parallel
Strand 4	H	6204	6211	anti-parallel
Strand 5	H	6194	6201	anti-parallel
Strand 6	H	6114	6118	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	6072	6075	first strand
Strand 2	H	6081	6085	anti-parallel
Strand 3	H	6088	6092	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8UH7

Analysis of interatomic Contacts of Structural Units in PDB entry:
8UH7