Analysis of interatomic Contacts of Structural Units in PDB entry:
8UIC

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8UIC entry

There are 2 chains in PDB entry 8UIC (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
K	PRO 2	THR 448
T	GLN 2	TYR 974

There are 62 helices in PDB entry 8UIC. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	K	41	45	Right-handed 310
Helix 2	AA2	K	76	83	Right-handed alpha
Helix 3	AA3	K	94	112	Right-handed alpha
Helix 4	AA4	K	122	132	Right-handed alpha
Helix 5	AA5	K	216	230	Right-handed alpha
Helix 6	AA6	K	244	249	Right-handed alpha
Helix 7	AA7	K	250	259	Right-handed alpha
Helix 8	AA8	K	273	286	Right-handed alpha
Helix 9	AA9	K	309	315	Right-handed 310
Helix 10	AB1	K	331	341	Right-handed alpha
Helix 11	AB2	K	358	365	Right-handed alpha
Helix 12	AB3	K	394	406	Right-handed alpha
Helix 13	AB4	K	416	432	Right-handed alpha
Helix 14	AB5	T	3	19	Right-handed alpha
Helix 15	AB6	T	28	40	Right-handed alpha
Helix 16	AB7	T	41	43	Right-handed 310
Helix 17	AB8	T	44	49	Right-handed alpha
Helix 18	AB9	T	51	64	Right-handed alpha
Helix 19	AC1	T	73	86	Right-handed alpha
Helix 20	AC2	T	90	98	Right-handed alpha
Helix 21	AC3	T	99	111	Right-handed alpha
Helix 22	AC4	T	117	131	Right-handed alpha
Helix 23	AC5	T	132	143	Right-handed alpha
Helix 24	AC6	T	144	155	Right-handed alpha
Helix 25	AC7	T	160	178	Right-handed alpha
Helix 26	AC8	T	181	200	Right-handed alpha
Helix 27	AC9	T	218	240	Right-handed alpha
Helix 28	AD1	T	245	253	Right-handed alpha
Helix 29	AD2	T	255	267	Right-handed alpha
Helix 30	AD3	T	269	293	Right-handed alpha
Helix 31	AD4	T	305	323	Right-handed alpha
Helix 32	AD5	T	325	343	Right-handed alpha
Helix 33	AD6	T	358	377	Right-handed alpha
Helix 34	AD7	T	394	399	Right-handed alpha
Helix 35	AD8	T	400	402	Right-handed 310
Helix 36	AD9	T	403	417	Right-handed alpha
Helix 37	AE1	T	432	443	Right-handed alpha
Helix 38	AE2	T	444	446	Right-handed 310
Helix 39	AE3	T	449	468	Right-handed alpha
Helix 40	AE4	T	505	523	Right-handed alpha
Helix 41	AE5	T	531	546	Right-handed alpha
Helix 42	AE6	T	549	567	Right-handed alpha
Helix 43	AE7	T	583	595	Right-handed alpha
Helix 44	AE8	T	599	617	Right-handed alpha
Helix 45	AE9	T	625	630	Right-handed alpha
Helix 46	AF1	T	632	643	Right-handed alpha
Helix 47	AF2	T	646	660	Right-handed alpha
Helix 48	AF3	T	663	670	Right-handed alpha
Helix 49	AF4	T	675	686	Right-handed alpha
Helix 50	AF5	T	690	707	Right-handed alpha
Helix 51	AF6	T	710	712	Right-handed 310
Helix 52	AF7	T	713	724	Right-handed alpha
Helix 53	AF8	T	730	750	Right-handed alpha
Helix 54	AF9	T	777	794	Right-handed alpha
Helix 55	AG1	T	795	806	Right-handed alpha
Helix 56	AG2	T	809	823	Right-handed alpha
Helix 57	AG3	T	873	880	Right-handed alpha
Helix 58	AG4	T	888	894	Right-handed alpha
Helix 59	AG5	T	913	919	Right-handed 310
Helix 60	AG6	T	921	932	Right-handed alpha
Helix 61	AG7	T	934	949	Right-handed alpha
Helix 62	AG8	T	950	964	Right-handed alpha

There are 6 sheets in PDB entry 8UIC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	4	6	first strand
Strand 2	K	444	446	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	64	65	first strand
Strand 2	K	90	93	parallel
Strand 3	K	133	136	parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	142	144	first strand
Strand 2	K	148	154	anti-parallel
Strand 3	K	162	167	anti-parallel
Strand 4	K	172	175	anti-parallel
Strand 5	K	200	204	parallel
Strand 6	K	411	415	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	320	323	first strand
Strand 2	K	235	238	parallel
Strand 3	K	347	350	parallel
Strand 4	K	383	386	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	265	266	first strand
Strand 2	K	305	306	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	370	371	first strand
Strand 2	K	377	378	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8UIC

Analysis of interatomic Contacts of Structural Units in PDB entry:
8UIC