Analysis of interatomic Contacts of Structural Units in PDB entry:
8UIN

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8UIN entry

There are 5 chains in PDB entry 8UIN (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
C	ALA 1	GLU 116
D	ALA 1	GLU 116
J	LYS 235	GLY 462
A	SER 1	PRO 641
B	GLU 731	GLU 933

There are 93 helices in PDB entry 8UIN. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	C	2	13	Right-handed alpha
Helix 2	AA2	C	22	38	Right-handed alpha
Helix 3	AA3	C	38	46	Right-handed alpha
Helix 4	AA4	C	55	79	Right-handed alpha
Helix 5	AA5	C	88	111	Right-handed alpha
Helix 6	AA6	C	112	114	Right-handed 310
Helix 7	AA7	D	2	13	Right-handed alpha
Helix 8	AA8	D	22	38	Right-handed alpha
Helix 9	AA9	D	38	47	Right-handed alpha
Helix 10	AB1	D	56	79	Right-handed alpha
Helix 11	AB2	D	88	111	Right-handed alpha
Helix 12	AB3	J	256	277	Right-handed alpha
Helix 13	AB4	J	301	305	Right-handed 310
Helix 14	AB5	J	306	315	Right-handed alpha
Helix 15	AB6	J	318	322	Right-handed 310
Helix 16	AB7	J	329	342	Right-handed alpha
Helix 17	AB8	J	373	384	Right-handed alpha
Helix 18	AB9	J	410	418	Right-handed alpha
Helix 19	AC1	J	431	433	Right-handed 310
Helix 20	AC2	J	436	444	Right-handed alpha
Helix 21	AC3	A	55	59	Right-handed 310
Helix 22	AC4	A	71	77	Right-handed alpha
Helix 23	AC5	A	263	266	Right-handed 310
Helix 24	AC6	A	281	289	Right-handed alpha
Helix 25	AC7	A	294	298	Right-handed 310
Helix 26	AC8	A	458	462	Right-handed 310
Helix 27	AC9	A	500	504	Right-handed 310
Helix 28	AD1	A	578	584	Right-handed alpha
Helix 29	AD2	A	590	601	Right-handed alpha
Helix 30	AD3	A	612	621	Right-handed alpha
Helix 31	AD4	B	978	982	Right-handed 310
Helix 32	AD5	B	988	1010	Right-handed alpha
Helix 33	AD6	B	1011	1016	Right-handed alpha
Helix 34	AD7	B	1018	1035	Right-handed alpha
Helix 35	AD8	B	1036	1038	Right-handed 310
Helix 36	AD9	B	1053	1068	Right-handed alpha
Helix 37	AE1	B	1074	1089	Right-handed alpha
Helix 38	AE2	B	1109	1113	Right-handed 310
Helix 39	AE3	B	1116	1131	Right-handed alpha
Helix 40	AE4	B	1142	1157	Right-handed alpha
Helix 41	AE5	B	1163	1178	Right-handed alpha
Helix 42	AE6	B	1182	1192	Right-handed alpha
Helix 43	AE7	B	1203	1222	Right-handed alpha
Helix 44	AE8	B	1226	1238	Right-handed alpha
Helix 45	AE9	B	1246	1261	Right-handed alpha
Helix 46	AF1	B	1392	1401	Right-handed alpha
Helix 47	AF2	B	1409	1414	Right-handed alpha
Helix 48	AF3	B	1507	1514	Right-handed alpha
Helix 49	AF4	B	1567	1570	Right-handed 310
Helix 50	AF5	B	1613	1616	Right-handed 310
Helix 51	AF6	B	1617	1637	Right-handed alpha
Helix 52	AF7	G	55	59	Right-handed 310
Helix 53	AF8	G	71	77	Right-handed alpha
Helix 54	AF9	G	263	266	Right-handed 310
Helix 55	AG1	G	281	289	Right-handed alpha
Helix 56	AG2	G	294	298	Right-handed 310
Helix 57	AG3	G	458	463	Right-handed alpha
Helix 58	AG4	G	500	504	Right-handed 310
Helix 59	AG5	G	578	584	Right-handed alpha
Helix 60	AG6	G	590	601	Right-handed alpha
Helix 61	AG7	G	612	621	Right-handed alpha
Helix 62	AG8	H	988	1010	Right-handed alpha
Helix 63	AG9	H	1011	1015	Right-handed 310
Helix 64	AH1	H	1016	1017	Right-handed 310
Helix 65	AH2	H	1018	1037	Right-handed alpha
Helix 66	AH3	H	1053	1068	Right-handed alpha
Helix 67	AH4	H	1074	1088	Right-handed alpha
Helix 68	AH5	H	1108	1113	Right-handed 310
Helix 69	AH6	H	1116	1132	Right-handed alpha
Helix 70	AH7	H	1133	1137	Right-handed 310
Helix 71	AH8	H	1142	1157	Right-handed alpha
Helix 72	AH9	H	1163	1178	Right-handed alpha
Helix 73	AI1	H	1182	1192	Right-handed alpha
Helix 74	AI2	H	1193	1196	Right-handed 310
Helix 75	AI3	H	1203	1222	Right-handed alpha
Helix 76	AI4	H	1226	1238	Right-handed alpha
Helix 77	AI5	H	1246	1263	Right-handed alpha
Helix 78	AI6	H	1392	1402	Right-handed alpha
Helix 79	AI7	H	1408	1413	Right-handed alpha
Helix 80	AI8	H	1507	1515	Right-handed alpha
Helix 81	AI9	H	1567	1572	Right-handed alpha
Helix 82	AJ1	H	1613	1616	Right-handed 310
Helix 83	AJ2	H	1617	1638	Right-handed alpha
Helix 84	AJ3	X	257	277	Right-handed alpha
Helix 85	AJ4	X	301	305	Right-handed 310
Helix 86	AJ5	X	306	317	Right-handed alpha
Helix 87	AJ6	X	318	322	Right-handed 310
Helix 88	AJ7	X	329	341	Right-handed alpha
Helix 89	AJ8	X	351	355	Right-handed 310
Helix 90	AJ9	X	373	384	Right-handed alpha
Helix 91	AK1	X	410	418	Right-handed alpha
Helix 92	AK2	X	431	434	Right-handed 310
Helix 93	AK3	X	436	444	Right-handed alpha

There are 51 sheets in PDB entry 8UIN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	294	297	first strand
Strand 2	J	286	289	anti-parallel
Strand 3	J	244	251	parallel
Strand 4	J	356	362	parallel
Strand 5	J	398	404	parallel
Strand 6	J	427	429	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	61	66	first strand
Strand 2	A	18	25	anti-parallel
Strand 3	A	3	9	anti-parallel
Strand 4	A	622	626	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	11	12	first strand
Strand 2	A	93	101	parallel
Strand 3	A	82	90	anti-parallel
Strand 4	A	33	40	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	107	112	first strand
Strand 2	A	122	130	anti-parallel
Strand 3	A	166	172	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	116	117	first strand
Strand 2	A	196	202	parallel
Strand 3	A	180	188	anti-parallel
Strand 4	A	140	146	anti-parallel
Strand 5	A	152	159	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	210	216	first strand
Strand 2	A	229	237	anti-parallel
Strand 3	A	276	280	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	245	248	first strand
Strand 2	A	301	310	anti-parallel
Strand 3	A	251	255	anti-parallel
Strand 4	A	258	261	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	245	248	first strand
Strand 2	A	301	310	anti-parallel
Strand 3	A	316	325	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	341	342	first strand
Strand 2	A	416	423	parallel
Strand 3	A	398	404	anti-parallel
Strand 4	A	366	369	anti-parallel
Strand 5	A	376	378	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	348	349	first strand
Strand 2	A	388	389	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	352	353	first strand
Strand 2	A	384	385	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	433	437	first strand
Strand 2	A	448	456	anti-parallel
Strand 3	A	492	498	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	477	485	first strand
Strand 2	A	467	474	anti-parallel
Strand 3	A	508	517	anti-parallel
Strand 4	A	521	530	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	542	545	first strand
Strand 2	A	558	566	anti-parallel
Strand 3	B	764	765	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	542	545	first strand
Strand 2	A	558	566	anti-parallel
Strand 3	B	768	772	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	748	749	first strand
Strand 2	A	570	577	anti-parallel
Strand 3	B	753	755	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	748	749	first strand
Strand 2	A	570	577	anti-parallel
Strand 3	B	779	787	anti-parallel
Strand 4	B	799	802	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	807	812	first strand
Strand 2	B	823	831	anti-parallel
Strand 3	B	873	880	anti-parallel
Strand 4	B	850	851	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	816	818	first strand
Strand 2	B	900	910	parallel
Strand 3	B	884	894	anti-parallel
Strand 4	B	840	844	anti-parallel
Strand 5	B	860	863	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	914	916	first strand
Strand 2	B	1318	1328	anti-parallel
Strand 3	B	919	925	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	914	916	first strand
Strand 2	B	1318	1328	anti-parallel
Strand 3	B	955	962	anti-parallel
Strand 4	B	1298	1302	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	935	940	first strand
Strand 2	B	1308	1313	anti-parallel
Strand 3	B	1271	1276	anti-parallel
Strand 4	B	1286	1290	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1339	1347	first strand
Strand 2	B	1361	1370	anti-parallel
Strand 3	B	1435	1443	anti-parallel
Strand 4	B	1389	1391	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1405	1406	first strand
Strand 2	B	1421	1426	anti-parallel
Strand 3	B	1379	1384	anti-parallel
Strand 4	B	1453	1459	anti-parallel
Strand 5	B	1467	1471	anti-parallel

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There are 7 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1589	1590	first strand
Strand 2	B	1597	1599	anti-parallel
Strand 3	B	1561	1565	parallel
Strand 4	B	1536	1549	anti-parallel
Strand 5	B	1521	1532	anti-parallel
Strand 6	B	1579	1584	anti-parallel
Strand 7	B	1605	1609	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	61	64	first strand
Strand 2	G	20	25	anti-parallel
Strand 3	G	3	9	anti-parallel
Strand 4	G	622	626	anti-parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	11	12	first strand
Strand 2	G	93	101	parallel
Strand 3	G	83	90	anti-parallel
Strand 4	G	31	39	anti-parallel
Strand 5	G	52	54	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	107	112	first strand
Strand 2	G	122	130	anti-parallel
Strand 3	G	166	172	anti-parallel

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There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	116	117	first strand
Strand 2	G	196	202	parallel
Strand 3	G	180	188	anti-parallel
Strand 4	G	141	146	anti-parallel
Strand 5	G	152	157	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	210	216	first strand
Strand 2	G	229	237	anti-parallel
Strand 3	G	276	280	anti-parallel

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There are 5 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	258	261	first strand
Strand 2	G	251	255	anti-parallel
Strand 3	G	301	310	anti-parallel
Strand 4	G	245	249	anti-parallel
Strand 5	G	267	271	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	258	261	first strand
Strand 2	G	251	255	anti-parallel
Strand 3	G	301	310	anti-parallel
Strand 4	G	316	325	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	332	334	first strand
Strand 2	G	352	355	anti-parallel
Strand 3	G	384	385	anti-parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	341	342	first strand
Strand 2	G	416	423	parallel
Strand 3	G	398	403	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	366	368	first strand
Strand 2	G	376	378	anti-parallel

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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	433	438	first strand
Strand 2	G	448	456	anti-parallel
Strand 3	G	492	498	anti-parallel

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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	478	485	first strand
Strand 2	G	467	473	anti-parallel
Strand 3	G	510	517	anti-parallel
Strand 4	G	521	528	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	506	507	first strand
Strand 2	G	531	532	anti-parallel

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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	542	545	first strand
Strand 2	G	558	565	anti-parallel
Strand 3	H	765	772	anti-parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	748	749	first strand
Strand 2	G	570	577	anti-parallel
Strand 3	H	779	787	anti-parallel
Strand 4	H	793	795	anti-parallel

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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	753	755	first strand
Strand 2	G	570	577	anti-parallel
Strand 3	H	779	787	anti-parallel
Strand 4	H	799	802	anti-parallel

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There are 3 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	809	811	first strand
Strand 2	H	823	829	anti-parallel
Strand 3	H	873	878	anti-parallel

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There are 5 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	816	818	first strand
Strand 2	H	900	910	parallel
Strand 3	H	884	894	anti-parallel
Strand 4	H	840	844	anti-parallel
Strand 5	H	860	861	anti-parallel

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There are 4 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	914	925	first strand
Strand 2	H	1318	1328	anti-parallel
Strand 3	H	955	961	anti-parallel
Strand 4	H	1298	1302	anti-parallel

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There are 4 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	935	940	first strand
Strand 2	H	1308	1313	anti-parallel
Strand 3	H	1271	1277	anti-parallel
Strand 4	H	1286	1290	anti-parallel

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There are 2 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	1038	1039	first strand
Strand 2	H	1043	1044	anti-parallel

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There are 4 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	1339	1347	first strand
Strand 2	H	1361	1370	anti-parallel
Strand 3	H	1437	1443	anti-parallel
Strand 4	H	1389	1391	anti-parallel

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There are 5 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	1405	1406	first strand
Strand 2	H	1421	1426	anti-parallel
Strand 3	H	1379	1384	anti-parallel
Strand 4	H	1453	1459	anti-parallel
Strand 5	H	1467	1471	anti-parallel

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There are 2 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	1482	1484	first strand
Strand 2	H	1489	1491	anti-parallel

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There are 7 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	1589	1590	first strand
Strand 2	H	1597	1599	anti-parallel
Strand 3	H	1559	1565	parallel
Strand 4	H	1536	1548	anti-parallel
Strand 5	H	1522	1532	anti-parallel
Strand 6	H	1579	1583	anti-parallel
Strand 7	H	1607	1608	anti-parallel

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There are 6 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	X	294	297	first strand
Strand 2	X	286	289	anti-parallel
Strand 3	X	245	251	parallel
Strand 4	X	357	362	parallel
Strand 5	X	398	404	parallel
Strand 6	X	427	429	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8UIN

Analysis of interatomic Contacts of Structural Units in PDB entry:
8UIN