Analysis of interatomic Contacts of Structural Units in PDB entry:
8UK6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8UK6 entry

There is 1 chain in PDB entry 8UK6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 214LYS 793
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 8UK6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
217 220Right-handed 310
Helix 2
AA2
A
221 226Right-handed alpha
Helix 3
AA3
A
237 240Right-handed 310
Helix 4
AA4
A
241 249Right-handed alpha
Helix 5
AA5
A
266 282Right-handed alpha
Helix 6
AA6
A
299 313Right-handed alpha
Helix 7
AA7
A
326 340Right-handed alpha
Helix 8
AA8
A
349 357Right-handed alpha
Helix 9
AA9
A
372 377Right-handed 310
Helix 10
AB1
A
378 391Right-handed alpha
Helix 11
AB2
A
411 415Right-handed 310
Helix 12
AB3
A
430 434Right-handed 310
Helix 13
AB4
A
439 451Right-handed alpha
Helix 14
AB5
A
461 464Right-handed 310
Helix 15
AB6
A
465 476Right-handed alpha
Helix 16
AB7
A
497 508Right-handed alpha
Helix 17
AB8
A
520 528Right-handed alpha
Helix 18
AB9
A
530 542Right-handed alpha
Helix 19
AC1
A
551 567Right-handed alpha
Helix 20
AC2
A
601 606Right-handed alpha
Helix 21
AC3
A
621 623Right-handed 310
Helix 22
AC4
A
705 709Right-handed 310
Helix 23
AC5
A
712 717Right-handed 310
Helix 24
AC6
A
718 720Right-handed 310
Helix 25
AC7
A
733 741Right-handed alpha
Helix 26
AC8
A
759 762Right-handed 310
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There are 8 sheets in PDB entry 8UK6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
253 256first strand
Strand 2
A
285 290parallel
Strand 3
A
319 322parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
343 346first strand
Strand 2
A
400 403anti-parallel
Strand 3
A
418 422anti-parallel
Strand 4
A
436 438anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
455 459first strand
Strand 2
A
482 486parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
569 570first strand
Strand 2
A
764 767parallel
Strand 3
A
771 775anti-parallel
Strand 4
A
785 791anti-parallel
Strand 5
A
693 697parallel
Strand 6
A
722 725anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
572 573first strand
Strand 2
A
729 730anti-parallel
Strand 3
A
689 690anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
650 658first strand
Strand 2
A
661 668anti-parallel
Strand 3
A
576 581parallel
Strand 4
A
615 619anti-parallel
Strand 5
A
683 684anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
590 595first strand
Strand 2
A
607 612anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
642 643first strand
Strand 2
A
679 680parallel
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