Analysis of interatomic Contacts of Structural Units in PDB entry:
8ULA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ULA entry

There is 1 chain in PDB entry 8ULA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 31GLY 429
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 8ULA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
42 60Right-handed alpha
Helix 2
AA2
A
71 85Right-handed alpha
Helix 3
AA3
A
96 105Right-handed alpha
Helix 4
AA4
A
109 121Right-handed alpha
Helix 5
AA5
A
122 125Right-handed 310
Helix 6
AA6
A
126 133Right-handed alpha
Helix 7
AA7
A
157 163Right-handed alpha
Helix 8
AA8
A
170 181Right-handed alpha
Helix 9
AA9
A
183 187Right-handed 310
Helix 10
AB1
A
198 212Right-handed alpha
Helix 11
AB2
A
227 241Right-handed alpha
Helix 12
AB3
A
242 244Right-handed 310
Helix 13
AB4
A
250 260Right-handed alpha
Helix 14
AB5
A
272 280Right-handed alpha
Helix 15
AB6
A
311 326Right-handed alpha
Helix 16
AB7
A
327 338Right-handed alpha
Helix 17
AB8
A
348 351Right-handed 310
Helix 18
AB9
A
352 357Right-handed alpha
Helix 19
AC1
A
358 364Right-handed alpha
Helix 20
AC2
A
366 374Right-handed alpha
Helix 21
AC3
A
375 378Right-handed 310
Helix 22
AC4
A
390 398Right-handed alpha
Helix 23
AC5
A
399 410Right-handed alpha
Helix 24
AC6
A
414 429Right-handed alpha
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There are 3 sheets in PDB entry 8ULA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 69first strand
Strand 2
A
32 38parallel
Strand 3
A
91 95parallel
Strand 4
A
298 306anti-parallel
Strand 5
A
144 156anti-parallel
Strand 6
A
265 269anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 69first strand
Strand 2
A
32 38parallel
Strand 3
A
91 95parallel
Strand 4
A
298 306anti-parallel
Strand 5
A
144 156anti-parallel
Strand 6
A
285 288anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
383 384first strand
Strand 2
A
387 388anti-parallel
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