Analysis of interatomic Contacts of Structural Units in PDB entry:
8ULG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ULG entry

There are 4 chains in PDB entry 8ULG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 5GLN 831
B
 SER 4LYS 827
C
 ARG 11ILE 87
D
 ILE 10ILE 87
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 84 helices in PDB entry 8ULG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 16Right-handed alpha
Helix 2
AA2
A
16 28Right-handed alpha
Helix 3
AA3
A
28 38Right-handed alpha
Helix 4
AA4
A
53 63Right-handed alpha
Helix 5
AA5
A
73 90Right-handed alpha
Helix 6
AA6
A
127 131Right-handed 310
Helix 7
AA7
A
139 148Right-handed alpha
Helix 8
AA8
A
164 170Right-handed alpha
Helix 9
AA9
A
204 215Right-handed alpha
Helix 10
AB1
A
215 249Right-handed alpha
Helix 11
AB2
A
254 266Right-handed alpha
Helix 12
AB3
A
287 297Right-handed alpha
Helix 13
AB4
A
345 354Right-handed alpha
Helix 14
AB5
A
362 365Right-handed 310
Helix 15
AB6
A
413 430Right-handed alpha
Helix 16
AB7
A
431 459Right-handed alpha
Helix 17
AB8
A
463 468Right-handed 310
Helix 18
AB9
A
470 475Right-handed alpha
Helix 19
AC1
A
483 495Right-handed alpha
Helix 20
AC2
A
497 502Right-handed alpha
Helix 21
AC3
A
514 529Right-handed alpha
Helix 22
AC4
A
531 536Right-handed alpha
Helix 23
AC5
A
538 553Right-handed alpha
Helix 24
AC6
A
560 577Right-handed alpha
Helix 25
AC7
A
585 598Right-handed alpha
Helix 26
AC8
A
607 614Right-handed alpha
Helix 27
AC9
A
616 622Right-handed alpha
Helix 28
AD1
A
625 641Right-handed alpha
Helix 29
AD2
A
642 645Right-handed 310
Helix 30
AD3
A
651 669Right-handed alpha
Helix 31
AD4
A
670 676Right-handed alpha
Helix 32
AD5
A
677 688Right-handed alpha
Helix 33
AD6
A
689 691Right-handed 310
Helix 34
AD7
A
693 702Right-handed alpha
Helix 35
AD8
A
704 721Right-handed alpha
Helix 36
AD9
A
722 725Right-handed 310
Helix 37
AE1
A
727 753Right-handed alpha
Helix 38
AE2
A
768 780Right-handed alpha
Helix 39
AE3
A
780 792Right-handed alpha
Helix 40
AE4
A
795 826Right-handed alpha
Helix 41
AE5
B
5 14Right-handed alpha
Helix 42
AE6
B
15 23Right-handed alpha
Helix 43
AE7
B
28 36Right-handed alpha
Helix 44
AE8
B
46 69Right-handed alpha
Helix 45
AE9
B
72 88Right-handed alpha
Helix 46
AF1
B
118 122Right-handed 310
Helix 47
AF2
B
125 129Right-handed 310
Helix 48
AF3
B
137 146Right-handed alpha
Helix 49
AF4
B
153 157Right-handed 310
Helix 50
AF5
B
162 169Right-handed alpha
Helix 51
AF6
B
202 213Right-handed alpha
Helix 52
AF7
B
213 247Right-handed alpha
Helix 53
AF8
B
252 264Right-handed alpha
Helix 54
AF9
B
285 294Right-handed alpha
Helix 55
AG1
B
339 342Right-handed 310
Helix 56
AG2
B
343 352Right-handed alpha
Helix 57
AG3
B
411 428Right-handed alpha
Helix 58
AG4
B
428 457Right-handed alpha
Helix 59
AG5
B
459 464Right-handed alpha
Helix 60
AG6
B
468 473Right-handed alpha
Helix 61
AG7
B
476 480Right-handed 310
Helix 62
AG8
B
481 493Right-handed alpha
Helix 63
AG9
B
512 528Right-handed alpha
Helix 64
AH1
B
528 533Right-handed alpha
Helix 65
AH2
B
536 551Right-handed alpha
Helix 66
AH3
B
558 575Right-handed alpha
Helix 67
AH4
B
578 582Right-handed 310
Helix 68
AH5
B
583 596Right-handed alpha
Helix 69
AH6
B
605 612Right-handed alpha
Helix 70
AH7
B
614 620Right-handed alpha
Helix 71
AH8
B
623 639Right-handed alpha
Helix 72
AH9
B
640 643Right-handed 310
Helix 73
AI1
B
649 667Right-handed alpha
Helix 74
AI2
B
668 675Right-handed alpha
Helix 75
AI3
B
676 690Right-handed alpha
Helix 76
AI4
B
691 700Right-handed alpha
Helix 77
AI5
B
702 719Right-handed alpha
Helix 78
AI6
B
720 723Right-handed 310
Helix 79
AI7
B
731 750Right-handed alpha
Helix 80
AI8
B
766 778Right-handed alpha
Helix 81
AI9
B
778 790Right-handed alpha
Helix 82
AJ1
B
793 823Right-handed alpha
Helix 83
AJ2
C
74 84Right-handed alpha
Helix 84
AJ3
D
74 84Right-handed alpha
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There are 4 sheets in PDB entry 8ULG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
105 115first strand
Strand 2
A
93 102anti-parallel
Strand 3
A
188 195anti-parallel
Strand 4
A
177 183anti-parallel
Strand 5
A
151 153anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
328 333first strand
Strand 2
A
315 322anti-parallel
Strand 3
A
272 280anti-parallel
Strand 4
A
397 406anti-parallel
Strand 5
A
384 391anti-parallel
Strand 6
A
357 360anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
103 106first strand
Strand 2
B
91 100anti-parallel
Strand 3
B
186 193anti-parallel
Strand 4
B
175 181anti-parallel
Strand 5
B
149 151anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
326 330first strand
Strand 2
B
313 320anti-parallel
Strand 3
B
270 278anti-parallel
Strand 4
B
395 404anti-parallel
Strand 5
B
383 389anti-parallel
Strand 6
B
355 357anti-parallel
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