Analysis of interatomic Contacts of Structural Units in PDB entry:
8UOH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8UOH entry

There are 2 chains in PDB entry 8UOH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 43SER 369
B
 GLY 43GLU 370
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 8UOH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
93 110Right-handed alpha
Helix 2
AA2
A
140 148Right-handed alpha
Helix 3
AA3
A
151 172Right-handed alpha
Helix 4
AA4
A
180 182Right-handed 310
Helix 5
AA5
A
200 204Right-handed 310
Helix 6
AA6
A
215 220Right-handed 310
Helix 7
AA7
A
221 226Right-handed alpha
Helix 8
AA8
A
231 249Right-handed alpha
Helix 9
AA9
A
257 268Right-handed alpha
Helix 10
AB1
A
277 288Right-handed alpha
Helix 11
AB2
A
291 295Right-handed 310
Helix 12
AB3
A
297 302Right-handed alpha
Helix 13
AB4
A
304 309Right-handed alpha
Helix 14
AB5
A
328 338Right-handed alpha
Helix 15
AB6
A
341 352Right-handed alpha
Helix 16
AB7
A
355 365Right-handed alpha
Helix 17
AB8
B
90 92Right-handed 310
Helix 18
AB9
B
93 110Right-handed alpha
Helix 19
AC1
B
140 148Right-handed alpha
Helix 20
AC2
B
151 172Right-handed alpha
Helix 21
AC3
B
180 182Right-handed 310
Helix 22
AC4
B
207 209Right-handed 310
Helix 23
AC5
B
210 215Right-handed alpha
Helix 24
AC6
B
216 219Right-handed 310
Helix 25
AC7
B
220 225Right-handed 310
Helix 26
AC8
B
231 249Right-handed alpha
Helix 27
AC9
B
257 268Right-handed alpha
Helix 28
AD1
B
277 288Right-handed alpha
Helix 29
AD2
B
291 295Right-handed 310
Helix 30
AD3
B
297 302Right-handed alpha
Helix 31
AD4
B
304 309Right-handed alpha
Helix 32
AD5
B
328 338Right-handed alpha
Helix 33
AD6
B
341 351Right-handed alpha
Helix 34
AD7
B
355 365Right-handed alpha
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There are 4 sheets in PDB entry 8UOH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 53first strand
Strand 2
A
56 64anti-parallel
Strand 3
A
68 75anti-parallel
Strand 4
A
81 88anti-parallel
Strand 5
A
127 132anti-parallel
Strand 6
A
118 123anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
138 139first strand
Strand 2
A
184 186anti-parallel
Strand 3
A
192 194anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
52 53first strand
Strand 2
B
56 64anti-parallel
Strand 3
B
68 75anti-parallel
Strand 4
B
81 88anti-parallel
Strand 5
B
127 132anti-parallel
Strand 6
B
118 123anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
138 139first strand
Strand 2
B
184 186anti-parallel
Strand 3
B
192 194anti-parallel
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