Analysis of interatomic Contacts of Structural Units in PDB entry:
8UOY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8UOY entry

There are 2 chains in PDB entry 8UOY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 HIS 0LYS 435
C
 HIS 0LYS 435
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 8UOY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
66 71Right-handed alpha
Helix 2
AA2
B
75 80Right-handed 310
Helix 3
AA3
B
86 99Right-handed alpha
Helix 4
AA4
B
107 127Right-handed alpha
Helix 5
AA5
B
130 135Right-handed alpha
Helix 6
AA6
B
152 156Right-handed 310
Helix 7
AA7
B
174 179Right-handed alpha
Helix 8
AA8
B
180 182Right-handed 310
Helix 9
AA9
B
183 197Right-handed alpha
Helix 10
AB1
B
216 229Right-handed alpha
Helix 11
AB2
B
245 249Right-handed alpha
Helix 12
AB3
B
259 262Right-handed 310
Helix 13
AB4
B
273 280Right-handed alpha
Helix 14
AB5
B
299 310Right-handed alpha
Helix 15
AB6
B
325 335Right-handed alpha
Helix 16
AB7
B
346 349Right-handed 310
Helix 17
AB8
B
350 364Right-handed alpha
Helix 18
AB9
B
380 390Right-handed alpha
Helix 19
AC1
B
401 406Right-handed alpha
Helix 20
AC2
B
407 416Right-handed alpha
Helix 21
AC3
C
58 62Right-handed 310
Helix 22
AC4
C
64 79Right-handed alpha
Helix 23
AC5
C
86 99Right-handed alpha
Helix 24
AC6
C
107 119Right-handed alpha
Helix 25
AC7
C
122 127Right-handed alpha
Helix 26
AC8
C
129 136Right-handed alpha
Helix 27
AC9
C
153 156Right-handed 310
Helix 28
AD1
C
174 179Right-handed alpha
Helix 29
AD2
C
184 197Right-handed alpha
Helix 30
AD3
C
215 229Right-handed alpha
Helix 31
AD4
C
245 249Right-handed alpha
Helix 32
AD5
C
260 262Right-handed 310
Helix 33
AD6
C
271 280Right-handed alpha
Helix 34
AD7
C
281 284Right-handed 310
Helix 35
AD8
C
299 311Right-handed alpha
Helix 36
AD9
C
325 335Right-handed alpha
Helix 37
AE1
C
346 348Right-handed 310
Helix 38
AE2
C
350 365Right-handed alpha
Helix 39
AE3
C
380 385Right-handed alpha
Helix 40
AE4
C
401 409Right-handed alpha
Helix 41
AE5
C
409 419Right-handed alpha
Helix 42
AE6
C
420 422Right-handed 310
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There are 7 sheets in PDB entry 8UOY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 14first strand
Strand 2
B
18 26anti-parallel
Strand 3
B
33 36anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
144 145first strand
Strand 2
B
393 394parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
162 169first strand
Strand 2
B
238 244anti-parallel
Strand 3
B
288 292parallel
Strand 4
B
315 318parallel
Strand 5
B
340 344parallel
Strand 6
B
367 371parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
250 251first strand
Strand 2
B
256 257anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
8 10first strand
Strand 2
C
22 26anti-parallel
Strand 3
C
32 35anti-parallel
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There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
144 151first strand
Strand 2
C
164 168anti-parallel
Strand 3
C
239 242anti-parallel
Strand 4
C
290 292parallel
Strand 5
C
315 318parallel
Strand 6
C
340 344parallel
Strand 7
C
367 371parallel
Strand 8
C
393 395parallel
Strand 9
C
144 151parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
250 251first strand
Strand 2
C
256 258anti-parallel
Strand 3
C
269 270anti-parallel
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