Analysis of interatomic Contacts of Structural Units in PDB entry:
8UR1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8UR1 entry

There are 2 chains in PDB entry 8UR1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 164
A
 GLN 166ARG 296
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 8UR1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 6Right-handed 310
Helix 2
AA2
A
23 36Right-handed alpha
Helix 3
AA3
A
50 54Right-handed 310
Helix 4
AA4
A
55 71Right-handed alpha
Helix 5
AA5
A
84 99Right-handed alpha
Helix 6
AA6
A
114 130Right-handed alpha
Helix 7
AA7
A
139 144Right-handed alpha
Helix 8
AA8
A
148 157Right-handed alpha
Helix 9
AA9
A
170 181Right-handed alpha
Helix 10
AB1
A
190 192Right-handed 310
Helix 11
AB2
A
193 201Right-handed alpha
Helix 12
AB3
A
209 227Right-handed alpha
Helix 13
AB4
A
228 250Right-handed alpha
Helix 14
AB5
A
250 262Right-handed alpha
Helix 15
AB6
A
278 280Right-handed 310
Helix 16
AB7
A
281 296Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8UR1.

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 10first strand
Strand 2
A
204 207parallel
Strand 3
A
185 188parallel
Strand 4
A
161 166parallel
Strand 5
A
134 138parallel
Strand 6
A
102 106parallel
Strand 7
A
75 79parallel
Strand 8
A
41 44parallel
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