Analysis of interatomic Contacts of Structural Units in PDB entry:
8UR6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8UR6 entry

There are 2 chains in PDB entry 8UR6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 0ILE 533
B
 HIS 0ILE 533
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 8UR6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 11Right-handed alpha
Helix 2
AA2
A
31 44Right-handed alpha
Helix 3
AA3
A
48 50Right-handed 310
Helix 4
AA4
A
87 94Right-handed alpha
Helix 5
AA5
A
106 118Right-handed alpha
Helix 6
AA6
A
143 156Right-handed alpha
Helix 7
AA7
A
157 162Right-handed 310
Helix 8
AA8
A
171 176Right-handed alpha
Helix 9
AA9
A
177 187Right-handed alpha
Helix 10
AB1
A
194 205Right-handed alpha
Helix 11
AB2
A
224 229Right-handed alpha
Helix 12
AB3
A
229 240Right-handed alpha
Helix 13
AB4
A
313 324Right-handed alpha
Helix 14
AB5
A
326 331Right-handed 310
Helix 15
AB6
A
332 337Right-handed alpha
Helix 16
AB7
A
354 365Right-handed alpha
Helix 17
AB8
A
431 443Right-handed alpha
Helix 18
AB9
A
449 457Right-handed alpha
Helix 19
AC1
A
507 524Right-handed alpha
Helix 20
AC2
B
6 11Right-handed alpha
Helix 21
AC3
B
31 44Right-handed alpha
Helix 22
AC4
B
48 50Right-handed 310
Helix 23
AC5
B
87 94Right-handed alpha
Helix 24
AC6
B
106 118Right-handed alpha
Helix 25
AC7
B
143 156Right-handed alpha
Helix 26
AC8
B
158 162Right-handed 310
Helix 27
AC9
B
165 169Right-handed 310
Helix 28
AD1
B
171 176Right-handed alpha
Helix 29
AD2
B
177 187Right-handed alpha
Helix 30
AD3
B
194 205Right-handed alpha
Helix 31
AD4
B
224 229Right-handed alpha
Helix 32
AD5
B
229 240Right-handed alpha
Helix 33
AD6
B
313 326Right-handed alpha
Helix 34
AD7
B
327 331Right-handed 310
Helix 35
AD8
B
332 337Right-handed alpha
Helix 36
AD9
B
354 365Right-handed alpha
Helix 37
AE1
B
431 443Right-handed alpha
Helix 38
AE2
B
449 456Right-handed alpha
Helix 39
AE3
B
507 524Right-handed alpha
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There are 8 sheets in PDB entry 8UR6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 4first strand
Strand 2
A
529 530parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
243 245first strand
Strand 2
A
52 55parallel
Strand 3
A
24 28parallel
Strand 4
A
284 288parallel
Strand 5
A
491 493parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 133first strand
Strand 2
A
126 128anti-parallel
Strand 3
A
380 382parallel
Strand 4
A
389 392anti-parallel
Strand 5
A
408 413anti-parallel
Strand 6
A
346 352anti-parallel
Strand 7
A
458 464anti-parallel
Strand 8
A
298 299anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
248 257first strand
Strand 2
A
262 271anti-parallel
Strand 3
A
274 279anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 4first strand
Strand 2
B
529 530parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
243 245first strand
Strand 2
B
52 55parallel
Strand 3
B
24 28parallel
Strand 4
B
284 289parallel
Strand 5
B
491 494parallel
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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
132 133first strand
Strand 2
B
126 128anti-parallel
Strand 3
B
380 382parallel
Strand 4
B
389 392anti-parallel
Strand 5
B
408 413anti-parallel
Strand 6
B
346 352anti-parallel
Strand 7
B
458 464anti-parallel
Strand 8
B
298 299anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
248 257first strand
Strand 2
B
262 271anti-parallel
Strand 3
B
274 279anti-parallel
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