Analysis of interatomic Contacts of Structural Units in PDB entry:
8UR7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8UR7 entry

There are 3 chains in PDB entry 8UR7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 52ILE 314
B
 ALA 52ILE 314
C
 ALA 52ILE 314
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 8UR7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
60 67Right-handed alpha
Helix 2
AA2
A
101 109Right-handed alpha
Helix 3
AA3
A
187 196Right-handed alpha
Helix 4
AA4
A
270 313Right-handed alpha
Helix 5
AA5
B
60 67Right-handed alpha
Helix 6
AA6
B
101 109Right-handed alpha
Helix 7
AA7
B
187 196Right-handed alpha
Helix 8
AA8
B
270 313Right-handed alpha
Helix 9
AA9
C
60 67Right-handed alpha
Helix 10
AB1
C
101 109Right-handed alpha
Helix 11
AB2
C
187 196Right-handed alpha
Helix 12
AB3
C
270 313Right-handed alpha
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There are 12 sheets in PDB entry 8UR7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
115 119first strand
Strand 2
A
256 260anti-parallel
Strand 3
A
175 184anti-parallel
Strand 4
A
251 254anti-parallel
Strand 5
A
151 153anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
115 119first strand
Strand 2
A
256 260anti-parallel
Strand 3
A
175 184anti-parallel
Strand 4
A
229 237anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
136 141first strand
Strand 2
A
144 146anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
164 169first strand
Strand 2
A
242 247anti-parallel
Strand 3
A
202 206anti-parallel
Strand 4
A
209 213anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
115 119first strand
Strand 2
B
256 260anti-parallel
Strand 3
B
175 184anti-parallel
Strand 4
B
251 254anti-parallel
Strand 5
B
151 153anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
115 119first strand
Strand 2
B
256 260anti-parallel
Strand 3
B
175 184anti-parallel
Strand 4
B
229 237anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
136 141first strand
Strand 2
B
144 146anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
164 169first strand
Strand 2
B
242 247anti-parallel
Strand 3
B
202 206anti-parallel
Strand 4
B
209 213anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
115 119first strand
Strand 2
C
256 260anti-parallel
Strand 3
C
175 184anti-parallel
Strand 4
C
251 254anti-parallel
Strand 5
C
151 153anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
115 119first strand
Strand 2
C
256 260anti-parallel
Strand 3
C
175 184anti-parallel
Strand 4
C
229 237anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
136 141first strand
Strand 2
C
144 146anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
164 169first strand
Strand 2
C
242 247anti-parallel
Strand 3
C
202 206anti-parallel
Strand 4
C
209 213anti-parallel
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