Analysis of interatomic Contacts of Structural Units in PDB entry:
8US1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8US1 entry

There is 1 chain in PDB entry 8US1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 23LEU 579
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 8US1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
36 48Right-handed alpha
Helix 2
AA2
A
54 76Right-handed alpha
Helix 3
AA3
A
116 121Right-handed 310
Helix 4
AA4
A
129 133Right-handed 310
Helix 5
AA5
A
141 157Right-handed alpha
Helix 6
AA6
A
204 210Right-handed alpha
Helix 7
AA7
A
221 235Right-handed alpha
Helix 8
AA8
A
462 466Right-handed 310
Helix 9
AA9
A
467 471Right-handed 310
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There are 4 sheets in PDB entry 8US1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 32first strand
Strand 2
A
94 100parallel
Strand 3
A
82 88anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
106 115first strand
Strand 2
A
177 185parallel
Strand 3
A
163 172anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
191 199first strand
Strand 2
A
258 267parallel
Strand 3
A
238 244anti-parallel
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There are 16 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
272 278first strand
Strand 2
A
286 293anti-parallel
Strand 3
A
302 310anti-parallel
Strand 4
A
313 323anti-parallel
Strand 5
A
330 343anti-parallel
Strand 6
A
346 360anti-parallel
Strand 7
A
366 380anti-parallel
Strand 8
A
383 401anti-parallel
Strand 9
A
410 420anti-parallel
Strand 10
A
430 443anti-parallel
Strand 11
A
447 459anti-parallel
Strand 12
A
502 515anti-parallel
Strand 13
A
518 530anti-parallel
Strand 14
A
539 550anti-parallel
Strand 15
A
553 562anti-parallel
Strand 16
A
569 575anti-parallel
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