Analysis of interatomic Contacts of Structural Units in PDB entry:
8US4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8US4 entry

There is 1 chain in PDB entry 8US4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
THR 272PRO 577
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 8US4. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
462 466Right-handed 310
Helix 2
AA2
A
467 471Right-handed 310
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There is 1 sheet (AA1) in PDB entry 8US4.

There are 16 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
273 278first strand
Strand 2
A
286 293anti-parallel
Strand 3
A
302 310anti-parallel
Strand 4
A
313 323anti-parallel
Strand 5
A
331 343anti-parallel
Strand 6
A
346 360anti-parallel
Strand 7
A
366 380anti-parallel
Strand 8
A
385 401anti-parallel
Strand 9
A
410 420anti-parallel
Strand 10
A
430 443anti-parallel
Strand 11
A
447 460anti-parallel
Strand 12
A
502 515anti-parallel
Strand 13
A
518 530anti-parallel
Strand 14
A
539 550anti-parallel
Strand 15
A
553 562anti-parallel
Strand 16
A
569 574anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il