Analysis of interatomic Contacts of Structural Units in PDB entry:
8USO

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8USO entry

There are 2 chains in PDB entry 8USO (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PHE 10	PRO 475
B	THR 6	ASP 196

There are 62 helices in PDB entry 8USO. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	35	37	Right-handed 310
Helix 2	AA2	A	48	50	Right-handed 310
Helix 3	AA3	A	51	68	Right-handed alpha
Helix 4	AA4	A	97	105	Right-handed alpha
Helix 5	AA5	A	109	130	Right-handed alpha
Helix 6	AA6	A	138	140	Right-handed 310
Helix 7	AA7	A	177	181	Right-handed 310
Helix 8	AA8	A	182	187	Right-handed alpha
Helix 9	AA9	A	193	210	Right-handed alpha
Helix 10	AB1	A	218	228	Right-handed alpha
Helix 11	AB2	A	236	241	Right-handed 310
Helix 12	AB3	A	242	253	Right-handed alpha
Helix 13	AB4	A	256	260	Right-handed 310
Helix 14	AB5	A	262	267	Right-handed alpha
Helix 15	AB6	A	269	274	Right-handed alpha
Helix 16	AB7	A	274	279	Right-handed alpha
Helix 17	AB8	A	284	302	Right-handed alpha
Helix 18	AB9	A	315	362	Right-handed alpha
Helix 19	AC1	A	364	371	Right-handed alpha
Helix 20	AC2	A	380	384	Right-handed 310
Helix 21	AC3	A	391	400	Right-handed alpha
Helix 22	AC4	A	400	405	Right-handed alpha
Helix 23	AC5	B	8	13	Right-handed alpha
Helix 24	AC6	B	51	68	Right-handed alpha
Helix 25	AC7	B	97	105	Right-handed alpha
Helix 26	AC8	B	109	130	Right-handed alpha
Helix 27	AC9	B	138	140	Right-handed 310
Helix 28	AD1	B	177	181	Right-handed 310
Helix 29	AD2	B	182	187	Right-handed alpha
Helix 30	AD3	B	193	210	Right-handed alpha
Helix 31	AD4	B	218	229	Right-handed alpha
Helix 32	AD5	B	236	241	Right-handed 310
Helix 33	AD6	B	242	253	Right-handed alpha
Helix 34	AD7	B	256	260	Right-handed 310
Helix 35	AD8	B	262	268	Right-handed alpha
Helix 36	AD9	B	269	274	Right-handed alpha
Helix 37	AE1	B	274	279	Right-handed alpha
Helix 38	AE2	B	284	302	Right-handed alpha
Helix 39	AE3	B	315	362	Right-handed alpha
Helix 40	AE4	B	364	371	Right-handed alpha
Helix 41	AE5	B	380	384	Right-handed 310
Helix 42	AE6	B	391	400	Right-handed alpha
Helix 43	AE7	C	34	37	Right-handed 310
Helix 44	AE8	C	51	68	Right-handed alpha
Helix 45	AE9	C	97	105	Right-handed alpha
Helix 46	AF1	C	109	130	Right-handed alpha
Helix 47	AF2	C	138	140	Right-handed 310
Helix 48	AF3	C	177	181	Right-handed 310
Helix 49	AF4	C	182	187	Right-handed alpha
Helix 50	AF5	C	193	210	Right-handed alpha
Helix 51	AF6	C	218	228	Right-handed alpha
Helix 52	AF7	C	236	241	Right-handed 310
Helix 53	AF8	C	242	253	Right-handed alpha
Helix 54	AF9	C	256	260	Right-handed 310
Helix 55	AG1	C	262	268	Right-handed alpha
Helix 56	AG2	C	269	274	Right-handed alpha
Helix 57	AG3	C	274	279	Right-handed alpha
Helix 58	AG4	C	284	301	Right-handed alpha
Helix 59	AG5	C	315	362	Right-handed alpha
Helix 60	AG6	C	364	371	Right-handed alpha
Helix 61	AG7	C	380	384	Right-handed 310
Helix 62	AG8	C	391	401	Right-handed alpha

There are 12 sheets in PDB entry 8USO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	14	22	first strand
Strand 2	A	26	33	anti-parallel
Strand 3	A	40	46	anti-parallel
Strand 4	A	85	91	anti-parallel
Strand 5	A	76	81	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	132	133	first strand
Strand 2	A	162	163	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	142	144	first strand
Strand 2	A	153	155	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	388	389	first strand
Strand 2	A	372	379	anti-parallel
Strand 3	A	460	470	parallel
Strand 4	A	443	457	anti-parallel
Strand 5	A	425	437	anti-parallel
Strand 6	A	409	420	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	14	22	first strand
Strand 2	B	27	33	anti-parallel
Strand 3	B	39	46	anti-parallel
Strand 4	B	85	90	anti-parallel
Strand 5	B	76	81	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	132	133	first strand
Strand 2	B	162	163	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	142	144	first strand
Strand 2	B	153	155	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	388	389	first strand
Strand 2	B	372	379	anti-parallel
Strand 3	B	460	470	parallel
Strand 4	B	443	457	anti-parallel
Strand 5	B	425	437	anti-parallel
Strand 6	B	409	420	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	19	22	first strand
Strand 2	C	27	33	anti-parallel
Strand 3	C	38	44	anti-parallel
Strand 4	C	89	91	anti-parallel
Strand 5	C	76	78	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	132	133	first strand
Strand 2	C	162	163	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	142	144	first strand
Strand 2	C	153	155	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	388	389	first strand
Strand 2	C	372	379	anti-parallel
Strand 3	C	460	470	parallel
Strand 4	C	443	457	anti-parallel
Strand 5	C	425	437	anti-parallel
Strand 6	C	409	420	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8USO

Analysis of interatomic Contacts of Structural Units in PDB entry:
8USO