Analysis of interatomic Contacts of Structural Units in PDB entry:
8USP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8USP entry

There are 3 chains in PDB entry 8USP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ALA 9ILE 1029
B
ALA 9ILE 1029
C
ALA 9ALA 9
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are325 helices in PDB entry 8USP. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
9 19Right-handed alpha
Helix 2
AA2
A
20 22Right-handed 310
Helix 3
AA3
A
24 39Right-handed alpha
Helix 4
AA4
A
40 51Right-handed alpha
Helix 5
AA5
A
57 75Right-handed alpha
Helix 6
AA6
A
80 98Right-handed alpha
Helix 7
AA7
A
101 113Right-handed alpha
Helix 8
AA8
A
119 133Right-handed alpha
Helix 9
AA9
A
140 158Right-handed alpha
Helix 10
AB1
A
168 182Right-handed alpha
Helix 11
AB2
A
188 206Right-handed alpha
Helix 12
AB3
A
208 212Right-handed 310
Helix 13
AB4
A
213 224Right-handed alpha
Helix 14
AB5
A
244 252Right-handed alpha
Helix 15
AB6
A
254 256Right-handed 310
Helix 16
AB7
A
257 269Right-handed alpha
Helix 17
AB8
A
273 290Right-handed alpha
Helix 18
AB9
A
293 314Right-handed alpha
Helix 19
AC1
A
339 359Right-handed alpha
Helix 20
AC2
A
359 380Right-handed alpha
Helix 21
AC3
A
383 396Right-handed alpha
Helix 22
AC4
A
398 414Right-handed alpha
Helix 23
AC5
A
419 442Right-handed alpha
Helix 24
AC6
A
456 461Right-handed alpha
Helix 25
AC7
A
461 474Right-handed alpha
Helix 26
AC8
A
480 497Right-handed alpha
Helix 27
AC9
A
502 520Right-handed alpha
Helix 28
AD1
A
522 540Right-handed alpha
Helix 29
AD2
A
540 556Right-handed alpha
Helix 30
AD3
A
573 584Right-handed alpha
Helix 31
AD4
A
588 610Right-handed alpha
Helix 32
AD5
A
613 632Right-handed alpha
Helix 33
AD6
A
638 659Right-handed alpha
Helix 34
AD7
A
666 683Right-handed alpha
Helix 35
AD8
A
685 687Right-handed 310
Helix 36
AD9
A
688 701Right-handed alpha
Helix 37
AE1
A
715 724Right-handed alpha
Helix 38
AE2
A
735 749Right-handed alpha
Helix 39
AE3
A
754 772Right-handed alpha
Helix 40
AE4
A
774 782Right-handed alpha
Helix 41
AE5
A
788 805Right-handed alpha
Helix 42
AE6
A
809 822Right-handed alpha
Helix 43
AE7
A
823 834Right-handed alpha
Helix 44
AE8
A
835 838Right-handed 310
Helix 45
AE9
A
859 877Right-handed alpha
Helix 46
AF1
A
881 899Right-handed alpha
Helix 47
AF2
A
900 904Right-handed 310
Helix 48
AF3
A
907 918Right-handed alpha
Helix 49
AF4
A
923 941Right-handed alpha
Helix 50
AF5
A
942 960Right-handed alpha
Helix 51
AF6
A
967 985Right-handed alpha
Helix 52
AF7
A
986 992Right-handed alpha
Helix 53
AF8
A
994 1001Right-handed alpha
Helix 54
AF9
A
1010 1029Right-handed alpha
Helix 55
AG1
B
10 20Right-handed alpha
Helix 56
AG2
B
24 39Right-handed alpha
Helix 57
AG3
B
40 51Right-handed alpha
Helix 58
AG4
B
52 55Right-handed 310
Helix 59
AG5
B
57 75Right-handed alpha
Helix 60
AG6
B
80 98Right-handed alpha
Helix 61
AG7
B
101 113Right-handed alpha
Helix 62
AG8
B
121 133Right-handed alpha
Helix 63
AG9
B
140 158Right-handed alpha
Helix 64
AH1
B
168 182Right-handed alpha
Helix 65
AH2
B
188 206Right-handed alpha
Helix 66
AH3
B
208 212Right-handed 310
Helix 67
AH4
B
213 224Right-handed alpha
Helix 68
AH5
B
244 252Right-handed alpha
Helix 69
AH6
B
254 256Right-handed 310
Helix 70
AH7
B
257 269Right-handed alpha
Helix 71
AH8
B
273 290Right-handed alpha
Helix 72
AH9
B
293 314Right-handed alpha
Helix 73
AI1
B
339 359Right-handed alpha
Helix 74
AI2
B
359 380Right-handed alpha
Helix 75
AI3
B
383 396Right-handed alpha
Helix 76
AI4
B
398 414Right-handed alpha
Helix 77
AI5
B
419 442Right-handed alpha
Helix 78
AI6
B
456 461Right-handed alpha
Helix 79
AI7
B
461 474Right-handed alpha
Helix 80
AI8
B
480 497Right-handed alpha
Helix 81
AI9
B
502 520Right-handed alpha
Helix 82
AJ1
B
522 540Right-handed alpha
Helix 83
AJ2
B
540 556Right-handed alpha
Helix 84
AJ3
B
573 584Right-handed alpha
Helix 85
AJ4
B
588 610Right-handed alpha
Helix 86
AJ5
B
613 631Right-handed alpha
Helix 87
AJ6
B
638 659Right-handed alpha
Helix 88
AJ7
B
666 683Right-handed alpha
Helix 89
AJ8
B
685 687Right-handed 310
Helix 90
AJ9
B
688 701Right-handed alpha
Helix 91
AK1
B
714 724Right-handed alpha
Helix 92
AK2
B
735 749Right-handed alpha
Helix 93
AK3
B
754 772Right-handed alpha
Helix 94
AK4
B
774 781Right-handed alpha
Helix 95
AK5
B
788 805Right-handed alpha
Helix 96
AK6
B
809 822Right-handed alpha
Helix 97
AK7
B
823 834Right-handed alpha
Helix 98
AK8
B
835 838Right-handed 310
Helix 99
AK9
B
859 877Right-handed alpha
Helix 100
AL1
B
881 899Right-handed alpha
Helix 101
AL2
B
900 904Right-handed 310
Helix 102
AL3
B
907 918Right-handed alpha
Helix 103
AL4
B
923 941Right-handed alpha
Helix 104
AL5
B
942 960Right-handed alpha
Helix 105
AL6
B
967 985Right-handed alpha
Helix 106
AL7
B
986 993Right-handed alpha
Helix 107
AL8
B
994 1001Right-handed alpha
Helix 108
AL9
B
1010 1029Right-handed alpha
Helix 109
AM1
C
10 19Right-handed alpha
Helix 110
AM2
C
20 22Right-handed 310
Helix 111
AM3
C
24 39Right-handed alpha
Helix 112
AM4
C
40 51Right-handed alpha
Helix 113
AM5
C
52 55Right-handed 310
Helix 114
AM6
C
57 75Right-handed alpha
Helix 115
AM7
C
80 98Right-handed alpha
Helix 116
AM8
C
101 113Right-handed alpha
Helix 117
AM9
C
121 133Right-handed alpha
Helix 118
AN1
C
140 158Right-handed alpha
Helix 119
AN2
C
168 182Right-handed alpha
Helix 120
AN3
C
188 206Right-handed alpha
Helix 121
AN4
C
208 213Right-handed 310
Helix 122
AN5
C
215 224Right-handed alpha
Helix 123
AN6
C
244 252Right-handed alpha
Helix 124
AN7
C
254 256Right-handed 310
Helix 125
AN8
C
257 269Right-handed alpha
Helix 126
AN9
C
273 290Right-handed alpha
Helix 127
AO1
C
293 314Right-handed alpha
Helix 128
AO2
C
339 359Right-handed alpha
Helix 129
AO3
C
359 380Right-handed alpha
Helix 130
AO4
C
383 396Right-handed alpha
Helix 131
AO5
C
398 414Right-handed alpha
Helix 132
AO6
C
419 442Right-handed alpha
Helix 133
AO7
C
461 474Right-handed alpha
Helix 134
AO8
C
480 497Right-handed alpha
Helix 135
AO9
C
502 520Right-handed alpha
Helix 136
AP1
C
522 540Right-handed alpha
Helix 137
AP2
C
540 556Right-handed alpha
Helix 138
AP3
C
573 584Right-handed alpha
Helix 139
AP4
C
588 610Right-handed alpha
Helix 140
AP5
C
613 632Right-handed alpha
Helix 141
AP6
C
638 659Right-handed alpha
Helix 142
AP7
C
666 683Right-handed alpha
Helix 143
AP8
C
685 687Right-handed 310
Helix 144
AP9
C
688 701Right-handed alpha
Helix 145
AQ1
C
715 724Right-handed alpha
Helix 146
AQ2
C
735 749Right-handed alpha
Helix 147
AQ3
C
754 772Right-handed alpha
Helix 148
AQ4
C
774 781Right-handed alpha
Helix 149
AQ5
C
788 805Right-handed alpha
Helix 150
AQ6
C
809 822Right-handed alpha
Helix 151
AQ7
C
826 834Right-handed alpha
Helix 152
AQ8
C
835 838Right-handed 310
Helix 153
AQ9
C
859 878Right-handed alpha
Helix 154
AR1
C
881 897Right-handed alpha
Helix 155
AR2
C
900 904Right-handed 310
Helix 156
AR3
C
907 918Right-handed alpha
Helix 157
AR4
C
923 941Right-handed alpha
Helix 158
AR5
C
942 960Right-handed alpha
Helix 159
AR6
C
967 985Right-handed alpha
Helix 160
AR7
C
986 993Right-handed alpha
Helix 161
AR8
C
994 1001Right-handed alpha
Helix 162
AR9
C
1010 1029Right-handed alpha
Helix 163
AS1
D
10 19Right-handed alpha
Helix 164
AS2
D
20 22Right-handed 310
Helix 165
AS3
D
24 39Right-handed alpha
Helix 166
AS4
D
40 51Right-handed alpha
Helix 167
AS5
D
52 55Right-handed 310
Helix 168
AS6
D
57 75Right-handed alpha
Helix 169
AS7
D
80 98Right-handed alpha
Helix 170
AS8
D
101 113Right-handed alpha
Helix 171
AS9
D
119 133Right-handed alpha
Helix 172
AT1
D
140 146Right-handed alpha
Helix 173
AT2
D
146 158Right-handed alpha
Helix 174
AT3
D
171 182Right-handed alpha
Helix 175
AT4
D
188 206Right-handed alpha
Helix 176
AT5
D
208 213Right-handed 310
Helix 177
AT6
D
216 224Right-handed alpha
Helix 178
AT7
D
244 252Right-handed alpha
Helix 179
AT8
D
253 256Right-handed 310
Helix 180
AT9
D
257 269Right-handed alpha
Helix 181
AU1
D
273 290Right-handed alpha
Helix 182
AU2
D
293 314Right-handed alpha
Helix 183
AU3
D
339 359Right-handed alpha
Helix 184
AU4
D
359 380Right-handed alpha
Helix 185
AU5
D
383 396Right-handed alpha
Helix 186
AU6
D
398 414Right-handed alpha
Helix 187
AU7
D
419 442Right-handed alpha
Helix 188
AU8
D
461 474Right-handed alpha
Helix 189
AU9
D
480 497Right-handed alpha
Helix 190
AV1
D
502 520Right-handed alpha
Helix 191
AV2
D
522 540Right-handed alpha
Helix 192
AV3
D
540 556Right-handed alpha
Helix 193
AV4
D
573 584Right-handed alpha
Helix 194
AV5
D
588 610Right-handed alpha
Helix 195
AV6
D
613 632Right-handed alpha
Helix 196
AV7
D
638 659Right-handed alpha
Helix 197
AV8
D
666 683Right-handed alpha
Helix 198
AV9
D
685 687Right-handed 310
Helix 199
AW1
D
688 701Right-handed alpha
Helix 200
AW2
D
714 724Right-handed alpha
Helix 201
AW3
D
735 749Right-handed alpha
Helix 202
AW4
D
754 772Right-handed alpha
Helix 203
AW5
D
774 781Right-handed alpha
Helix 204
AW6
D
788 805Right-handed alpha
Helix 205
AW7
D
809 822Right-handed alpha
Helix 206
AW8
D
823 834Right-handed alpha
Helix 207
AW9
D
835 838Right-handed 310
Helix 208
AX1
D
859 878Right-handed alpha
Helix 209
AX2
D
881 899Right-handed alpha
Helix 210
AX3
D
900 904Right-handed 310
Helix 211
AX4
D
907 918Right-handed alpha
Helix 212
AX5
D
923 941Right-handed alpha
Helix 213
AX6
D
942 960Right-handed alpha
Helix 214
AX7
D
967 985Right-handed alpha
Helix 215
AX8
D
986 992Right-handed alpha
Helix 216
AX9
D
994 1001Right-handed alpha
Helix 217
AY1
D
1010 1029Right-handed alpha
Helix 218
AY2
E
10 19Right-handed alpha
Helix 219
AY3
E
20 22Right-handed 310
Helix 220
AY4
E
24 39Right-handed alpha
Helix 221
AY5
E
40 51Right-handed alpha
Helix 222
AY6
E
52 55Right-handed 310
Helix 223
AY7
E
57 75Right-handed alpha
Helix 224
AY8
E
80 98Right-handed alpha
Helix 225
AY9
E
101 113Right-handed alpha
Helix 226
AZ1
E
121 134Right-handed alpha
Helix 227
AZ2
E
145 158Right-handed alpha
Helix 228
AZ3
E
168 182Right-handed alpha
Helix 229
AZ4
E
188 206Right-handed alpha
Helix 230
AZ5
E
208 213Right-handed 310
Helix 231
AZ6
E
216 224Right-handed alpha
Helix 232
AZ7
E
244 252Right-handed alpha
Helix 233
AZ8
E
254 256Right-handed 310
Helix 234
AZ9
E
257 269Right-handed alpha
Helix 235
BA1
E
273 290Right-handed alpha
Helix 236
BA2
E
293 314Right-handed alpha
Helix 237
BA3
E
339 359Right-handed alpha
Helix 238
BA4
E
359 380Right-handed alpha
Helix 239
BA5
E
383 396Right-handed alpha
Helix 240
BA6
E
398 414Right-handed alpha
Helix 241
BA7
E
419 442Right-handed alpha
Helix 242
BA8
E
456 461Right-handed alpha
Helix 243
BA9
E
461 474Right-handed alpha
Helix 244
BB1
E
480 497Right-handed alpha
Helix 245
BB2
E
502 520Right-handed alpha
Helix 246
BB3
E
522 540Right-handed alpha
Helix 247
BB4
E
540 556Right-handed alpha
Helix 248
BB5
E
573 584Right-handed alpha
Helix 249
BB6
E
588 610Right-handed alpha
Helix 250
BB7
E
613 632Right-handed alpha
Helix 251
BB8
E
638 659Right-handed alpha
Helix 252
BB9
E
666 683Right-handed alpha
Helix 253
BC1
E
685 687Right-handed 310
Helix 254
BC2
E
688 701Right-handed alpha
Helix 255
BC3
E
715 724Right-handed alpha
Helix 256
BC4
E
735 749Right-handed alpha
Helix 257
BC5
E
754 772Right-handed alpha
Helix 258
BC6
E
774 781Right-handed alpha
Helix 259
BC7
E
788 805Right-handed alpha
Helix 260
BC8
E
809 822Right-handed alpha
Helix 261
BC9
E
823 834Right-handed alpha
Helix 262
BD1
E
835 838Right-handed 310
Helix 263
BD2
E
859 877Right-handed alpha
Helix 264
BD3
E
881 897Right-handed alpha
Helix 265
BD4
E
900 904Right-handed 310
Helix 266
BD5
E
907 918Right-handed alpha
Helix 267
BD6
E
923 941Right-handed alpha
Helix 268
BD7
E
942 961Right-handed alpha
Helix 269
BD8
E
967 985Right-handed alpha
Helix 270
BD9
E
986 993Right-handed alpha
Helix 271
BE1
E
994 1001Right-handed alpha
Helix 272
BE2
E
1010 1029Right-handed alpha
Helix 273
BE3
F
10 20Right-handed alpha
Helix 274
BE4
F
24 39Right-handed alpha
Helix 275
BE5
F
40 51Right-handed alpha
Helix 276
BE6
F
52 55Right-handed 310
Helix 277
BE7
F
57 75Right-handed alpha
Helix 278
BE8
F
80 98Right-handed alpha
Helix 279
BE9
F
101 113Right-handed alpha
Helix 280
BF1
F
121 133Right-handed alpha
Helix 281
BF2
F
140 158Right-handed alpha
Helix 282
BF3
F
168 182Right-handed alpha
Helix 283
BF4
F
188 206Right-handed alpha
Helix 284
BF5
F
208 213Right-handed 310
Helix 285
BF6
F
214 224Right-handed alpha
Helix 286
BF7
F
244 252Right-handed alpha
Helix 287
BF8
F
254 256Right-handed 310
Helix 288
BF9
F
257 269Right-handed alpha
Helix 289
BG1
F
273 290Right-handed alpha
Helix 290
BG2
F
293 314Right-handed alpha
Helix 291
BG3
F
339 359Right-handed alpha
Helix 292
BG4
F
359 380Right-handed alpha
Helix 293
BG5
F
383 396Right-handed alpha
Helix 294
BG6
F
398 414Right-handed alpha
Helix 295
BG7
F
419 442Right-handed alpha
Helix 296
BG8
F
461 474Right-handed alpha
Helix 297
BG9
F
480 497Right-handed alpha
Helix 298
BH1
F
502 520Right-handed alpha
Helix 299
BH2
F
522 540Right-handed alpha
Helix 300
BH3
F
540 556Right-handed alpha
Helix 301
BH4
F
573 584Right-handed alpha
Helix 302
BH5
F
588 610Right-handed alpha
Helix 303
BH6
F
613 632Right-handed alpha
Helix 304
BH7
F
638 659Right-handed alpha
Helix 305
BH8
F
666 683Right-handed alpha
Helix 306
BH9
F
685 687Right-handed 310
Helix 307
BI1
F
688 701Right-handed alpha
Helix 308
BI2
F
714 724Right-handed alpha
Helix 309
BI3
F
735 749Right-handed alpha
Helix 310
BI4
F
754 772Right-handed alpha
Helix 311
BI5
F
774 781Right-handed alpha
Helix 312
BI6
F
788 805Right-handed alpha
Helix 313
BI7
F
809 822Right-handed alpha
Helix 314
BI8
F
826 834Right-handed alpha
Helix 315
BI9
F
835 838Right-handed 310
Helix 316
BJ1
F
859 877Right-handed alpha
Helix 317
BJ2
F
881 897Right-handed alpha
Helix 318
BJ3
F
900 904Right-handed 310
Helix 319
BJ4
F
907 918Right-handed alpha
Helix 320
BJ5
F
923 941Right-handed alpha
Helix 321
BJ6
F
942 960Right-handed alpha
Helix 322
BJ7
F
967 985Right-handed alpha
Helix 323
BJ8
F
986 992Right-handed alpha
Helix 324
BJ9
F
994 1001Right-handed alpha
Helix 325
BK1
F
1010 1029Right-handed alpha
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