Analysis of interatomic Contacts of Structural Units in PDB entry:
8USW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8USW entry

There are 4 chains in PDB entry 8USW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 25	CYS 798
B	CYS 38	VAL 955
C	LYS 25	CYS 798
D	CYS 38	VAL 955

There are 99 helices in PDB entry 8USW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	34	52	Right-handed alpha
Helix 2	AA2	A	70	82	Right-handed alpha
Helix 3	AA3	A	103	111	Right-handed alpha
Helix 4	AA4	A	112	115	Right-handed 310
Helix 5	AA5	A	145	158	Right-handed alpha
Helix 6	AA6	A	170	188	Right-handed alpha
Helix 7	AA7	A	206	212	Right-handed 310
Helix 8	AA8	A	224	238	Right-handed alpha
Helix 9	AA9	A	250	254	Right-handed 310
Helix 10	AB1	A	256	261	Right-handed 310
Helix 11	AB2	A	276	296	Right-handed alpha
Helix 12	AB3	A	318	326	Right-handed alpha
Helix 13	AB4	A	458	471	Right-handed alpha
Helix 14	AB5	A	499	508	Right-handed alpha
Helix 15	AB6	A	521	525	Right-handed 310
Helix 16	AB7	A	560	578	Right-handed alpha
Helix 17	AB8	A	629	658	Right-handed alpha
Helix 18	AB9	A	670	674	Right-handed 310
Helix 19	AC1	A	688	696	Right-handed alpha
Helix 20	AC2	A	697	700	Right-handed 310
Helix 21	AC3	A	703	709	Right-handed alpha
Helix 22	AC4	A	713	719	Right-handed alpha
Helix 23	AC5	A	720	724	Right-handed 310
Helix 24	AC6	A	733	743	Right-handed alpha
Helix 25	AC7	A	768	781	Right-handed alpha
Helix 26	AC8	A	783	793	Right-handed alpha
Helix 27	AC9	B	39	45	Right-handed alpha
Helix 28	AD1	B	125	138	Right-handed alpha
Helix 29	AD2	B	176	192	Right-handed alpha
Helix 30	AD3	B	202	217	Right-handed alpha
Helix 31	AD4	B	246	260	Right-handed alpha
Helix 32	AD5	B	276	285	Right-handed alpha
Helix 33	AD6	B	303	320	Right-handed alpha
Helix 34	AD7	B	331	345	Right-handed alpha
Helix 35	AD8	B	384	407	Right-handed alpha
Helix 36	AD9	B	407	413	Right-handed alpha
Helix 37	AE1	B	428	439	Right-handed alpha
Helix 38	AE2	B	550	562	Right-handed alpha
Helix 39	AE3	B	569	571	Right-handed 310
Helix 40	AE4	B	578	592	Right-handed alpha
Helix 41	AE5	B	614	621	Right-handed alpha
Helix 42	AE6	B	636	642	Right-handed alpha
Helix 43	AE7	B	741	769	Right-handed alpha
Helix 44	AE8	B	802	808	Right-handed alpha
Helix 45	AE9	B	813	817	Right-handed 310
Helix 46	AF1	B	825	834	Right-handed alpha
Helix 47	AF2	B	846	853	Right-handed alpha
Helix 48	AF3	B	881	884	Right-handed 310
Helix 49	AF4	B	885	898	Right-handed alpha
Helix 50	AF5	B	899	908	Right-handed alpha
Helix 51	AF6	B	927	955	Right-handed alpha
Helix 52	AF7	C	34	53	Right-handed alpha
Helix 53	AF8	C	70	82	Right-handed alpha
Helix 54	AF9	C	103	114	Right-handed alpha
Helix 55	AG1	C	143	155	Right-handed alpha
Helix 56	AG2	C	170	187	Right-handed alpha
Helix 57	AG3	C	204	210	Right-handed alpha
Helix 58	AG4	C	211	213	Right-handed 310
Helix 59	AG5	C	224	238	Right-handed alpha
Helix 60	AG6	C	256	261	Right-handed 310
Helix 61	AG7	C	276	296	Right-handed alpha
Helix 62	AG8	C	318	326	Right-handed alpha
Helix 63	AG9	C	458	469	Right-handed alpha
Helix 64	AH1	C	499	506	Right-handed alpha
Helix 65	AH2	C	558	579	Right-handed alpha
Helix 66	AH3	C	629	657	Right-handed alpha
Helix 67	AH4	C	669	674	Right-handed 310
Helix 68	AH5	C	687	693	Right-handed alpha
Helix 69	AH6	C	696	698	Right-handed 310
Helix 70	AH7	C	699	707	Right-handed alpha
Helix 71	AH8	C	713	724	Right-handed alpha
Helix 72	AH9	C	732	743	Right-handed alpha
Helix 73	AI1	C	770	782	Right-handed alpha
Helix 74	AI2	C	783	793	Right-handed alpha
Helix 75	AI3	D	39	45	Right-handed alpha
Helix 76	AI4	D	125	137	Right-handed alpha
Helix 77	AI5	D	176	192	Right-handed alpha
Helix 78	AI6	D	202	217	Right-handed alpha
Helix 79	AI7	D	246	260	Right-handed alpha
Helix 80	AI8	D	276	286	Right-handed alpha
Helix 81	AI9	D	303	320	Right-handed alpha
Helix 82	AJ1	D	331	346	Right-handed alpha
Helix 83	AJ2	D	361	365	Right-handed 310
Helix 84	AJ3	D	384	405	Right-handed alpha
Helix 85	AJ4	D	407	413	Right-handed alpha
Helix 86	AJ5	D	428	439	Right-handed alpha
Helix 87	AJ6	D	552	562	Right-handed alpha
Helix 88	AJ7	D	569	573	Right-handed 310
Helix 89	AJ8	D	578	592	Right-handed alpha
Helix 90	AJ9	D	616	622	Right-handed alpha
Helix 91	AK1	D	635	642	Right-handed alpha
Helix 92	AK2	D	741	767	Right-handed alpha
Helix 93	AK3	D	782	787	Right-handed alpha
Helix 94	AK4	D	800	810	Right-handed alpha
Helix 95	AK5	D	812	818	Right-handed alpha
Helix 96	AK6	D	824	834	Right-handed alpha
Helix 97	AK7	D	883	897	Right-handed alpha
Helix 98	AK8	D	898	908	Right-handed alpha
Helix 99	AK9	D	927	954	Right-handed alpha

There are 29 sheets in PDB entry 8USW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	59	65	first strand
Strand 2	A	26	32	parallel
Strand 3	A	87	92	parallel
Strand 4	A	118	120	parallel
Strand 5	A	137	139	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	194	197	first strand
Strand 2	A	164	168	parallel
Strand 3	A	218	221	parallel
Strand 4	A	246	248	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	270	271	first strand
Strand 2	A	351	357	anti-parallel
Strand 3	A	360	367	anti-parallel
Strand 4	A	372	373	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	473	477	first strand
Strand 2	A	397	401	parallel
Strand 3	A	512	513	parallel
Strand 4	A	761	762	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	409	412	first strand
Strand 2	A	452	457	anti-parallel
Strand 3	A	434	437	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	535	536	first strand
Strand 2	A	756	757	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	681	682	first strand
Strand 2	A	728	732	parallel
Strand 3	A	538	542	anti-parallel
Strand 4	A	747	749	anti-parallel

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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	147	152	first strand
Strand 2	B	47	53	parallel
Strand 3	B	193	198	parallel
Strand 4	B	220	226	parallel
Strand 5	B	237	243	parallel
Strand 6	B	456	460	parallel
Strand 7	B	447	452	anti-parallel
Strand 8	B	441	444	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	290	295	first strand
Strand 2	B	264	269	parallel
Strand 3	B	325	328	parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	355	359	first strand
Strand 2	B	375	379	parallel
Strand 3	B	463	470	anti-parallel
Strand 4	B	476	485	anti-parallel
Strand 5	B	488	490	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	513	515	first strand
Strand 2	B	593	595	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	518	519	first strand
Strand 2	B	598	599	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	541	544	first strand
Strand 2	B	573	576	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	842	845	first strand
Strand 2	B	653	656	anti-parallel
Strand 3	B	863	864	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	26	32	first strand
Strand 2	C	59	65	parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	91	92	first strand
Strand 2	C	119	120	parallel
Strand 3	C	138	139	parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	194	196	first strand
Strand 2	C	163	167	parallel
Strand 3	C	218	222	parallel
Strand 4	C	246	248	parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	351	357	first strand
Strand 2	C	360	367	anti-parallel
Strand 3	C	372	374	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	398	402	first strand
Strand 2	C	474	478	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	434	437	first strand
Strand 2	C	452	455	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	513	517	first strand
Strand 2	C	759	763	anti-parallel
Strand 3	C	527	528	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	730	731	first strand
Strand 2	C	535	540	anti-parallel
Strand 3	C	753	757	anti-parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	148	152	first strand
Strand 2	D	48	52	parallel
Strand 3	D	193	198	parallel
Strand 4	D	220	224	parallel
Strand 5	D	237	241	parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	290	291	first strand
Strand 2	D	264	269	parallel
Strand 3	D	295	296	parallel

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There are 8 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	290	291	first strand
Strand 2	D	264	269	parallel
Strand 3	D	324	328	parallel
Strand 4	D	353	359	parallel
Strand 5	D	374	379	parallel
Strand 6	D	463	470	anti-parallel
Strand 7	D	476	485	anti-parallel
Strand 8	D	488	490	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	441	443	first strand
Strand 2	D	448	452	anti-parallel
Strand 3	D	456	460	anti-parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	514	519	first strand
Strand 2	D	594	599	parallel
Strand 3	D	541	544	parallel
Strand 4	D	574	577	anti-parallel
Strand 5	D	527	529	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	606	609	first strand
Strand 2	D	612	615	anti-parallel

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There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	821	822	first strand
Strand 2	D	794	797	parallel
Strand 3	D	841	845	parallel
Strand 4	D	653	658	anti-parallel
Strand 5	D	861	863	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8USW

Analysis of interatomic Contacts of Structural Units in PDB entry:
8USW