Analysis of interatomic Contacts of Structural Units in PDB entry:
8USZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8USZ entry

There are 3 chains in PDB entry 8USZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 25	PRO 1143
B	THR 25	PRO 1143
C	THR 25	PRO 1143

There are 53 helices in PDB entry 8USZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	294	303	Right-handed alpha
Helix 2	AA2	A	383	387	Right-handed 310
Helix 3	AA3	A	406	410	Right-handed 310
Helix 4	AA4	A	749	754	Right-handed alpha
Helix 5	AA5	A	758	782	Right-handed alpha
Helix 6	AA6	A	816	825	Right-handed alpha
Helix 7	AA7	A	853	856	Right-handed 310
Helix 8	AA8	A	866	884	Right-handed alpha
Helix 9	AA9	A	886	890	Right-handed 310
Helix 10	AB1	A	897	907	Right-handed alpha
Helix 11	AB2	A	908	910	Right-handed 310
Helix 12	AB3	A	912	919	Right-handed alpha
Helix 13	AB4	A	919	937	Right-handed alpha
Helix 14	AB5	A	946	965	Right-handed alpha
Helix 15	AB6	A	966	968	Right-handed 310
Helix 16	AB7	A	976	984	Right-handed alpha
Helix 17	AB8	A	990	1032	Right-handed alpha
Helix 18	AB9	A	1116	1118	Right-handed 310
Helix 19	AC1	B	294	304	Right-handed alpha
Helix 20	AC2	B	338	343	Right-handed alpha
Helix 21	AC3	B	383	387	Right-handed 310
Helix 22	AC4	B	737	743	Right-handed alpha
Helix 23	AC5	B	746	751	Right-handed alpha
Helix 24	AC6	B	752	757	Right-handed 310
Helix 25	AC7	B	758	783	Right-handed alpha
Helix 26	AC8	B	816	826	Right-handed alpha
Helix 27	AC9	B	866	884	Right-handed alpha
Helix 28	AD1	B	897	908	Right-handed alpha
Helix 29	AD2	B	913	919	Right-handed alpha
Helix 30	AD3	B	919	932	Right-handed alpha
Helix 31	AD4	B	933	939	Right-handed alpha
Helix 32	AD5	B	948	965	Right-handed alpha
Helix 33	AD6	B	966	968	Right-handed 310
Helix 34	AD7	B	977	982	Right-handed alpha
Helix 35	AD8	B	989	1032	Right-handed alpha
Helix 36	AD9	B	1116	1118	Right-handed 310
Helix 37	AE1	C	294	301	Right-handed alpha
Helix 38	AE2	C	417	422	Right-handed alpha
Helix 39	AE3	C	737	743	Right-handed alpha
Helix 40	AE4	C	746	753	Right-handed alpha
Helix 41	AE5	C	754	757	Right-handed 310
Helix 42	AE6	C	758	782	Right-handed alpha
Helix 43	AE7	C	816	826	Right-handed alpha
Helix 44	AE8	C	851	856	Right-handed alpha
Helix 45	AE9	C	866	884	Right-handed alpha
Helix 46	AF1	C	886	890	Right-handed 310
Helix 47	AF2	C	897	908	Right-handed alpha
Helix 48	AF3	C	913	919	Right-handed alpha
Helix 49	AF4	C	919	939	Right-handed alpha
Helix 50	AF5	C	945	965	Right-handed alpha
Helix 51	AF6	C	966	968	Right-handed 310
Helix 52	AF7	C	976	982	Right-handed alpha
Helix 53	AF8	C	991	1033	Right-handed alpha

There are 45 sheets in PDB entry 8USZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	26	30	first strand
Strand 2	A	61	65	anti-parallel
Strand 3	A	265	269	anti-parallel
Strand 4	A	90	94	anti-parallel
Strand 5	A	190	195	anti-parallel
Strand 6	A	201	207	anti-parallel
Strand 7	A	222	229	anti-parallel
Strand 8	A	36	37	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	42	43	first strand
Strand 2	C	565	566	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	48	49	first strand
Strand 2	A	277	279	anti-parallel
Strand 3	A	285	287	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	52	55	first strand
Strand 2	A	271	274	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	84	85	first strand
Strand 2	A	237	239	anti-parallel
Strand 3	A	104	107	anti-parallel
Strand 4	A	117	121	anti-parallel
Strand 5	A	126	129	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	311	319	first strand
Strand 2	A	592	599	anti-parallel
Strand 3	A	609	613	anti-parallel
Strand 4	A	648	651	anti-parallel
Strand 5	A	642	644	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	325	328	first strand
Strand 2	A	539	543	parallel
Strand 3	A	547	550	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	357	358	first strand
Strand 2	A	395	396	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	398	400	first strand
Strand 2	A	510	512	anti-parallel
Strand 3	A	434	435	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	452	453	first strand
Strand 2	A	493	494	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	584	586	first strand
Strand 2	A	573	577	anti-parallel
Strand 3	A	565	567	anti-parallel
Strand 4	B	42	43	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	654	660	first strand
Strand 2	A	693	697	parallel
Strand 3	A	670	673	anti-parallel
Strand 4	A	664	667	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	702	704	first strand
Strand 2	B	788	790	parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	717	728	first strand
Strand 2	A	1059	1070	anti-parallel
Strand 3	A	1048	1056	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	734	736	first strand
Strand 2	A	858	860	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	788	790	first strand
Strand 2	C	702	704	parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1076	1077	first strand
Strand 2	A	1094	1097	anti-parallel
Strand 3	A	1102	1105	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1120	1122	first strand
Strand 2	A	1086	1090	anti-parallel
Strand 3	A	1081	1083	anti-parallel
Strand 4	A	1133	1134	parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	52	53	first strand
Strand 2	B	273	279	anti-parallel
Strand 3	B	285	290	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	224	230	first strand
Strand 2	B	200	208	anti-parallel
Strand 3	B	189	195	anti-parallel
Strand 4	B	90	93	anti-parallel
Strand 5	B	266	269	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	116	120	first strand
Strand 2	B	103	107	anti-parallel
Strand 3	B	238	241	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	126	129	first strand
Strand 2	B	169	172	anti-parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	311	319	first strand
Strand 2	B	592	599	anti-parallel
Strand 3	B	609	612	anti-parallel
Strand 4	B	648	651	anti-parallel
Strand 5	B	642	645	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	354	357	first strand
Strand 2	B	396	403	anti-parallel
Strand 3	B	507	514	anti-parallel
Strand 4	B	432	436	anti-parallel
Strand 5	B	378	379	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	391	392	first strand
Strand 2	B	524	525	anti-parallel

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There are 6 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	538	540	first strand
Strand 2	B	549	553	anti-parallel
Strand 3	B	584	588	anti-parallel
Strand 4	B	573	577	anti-parallel
Strand 5	B	565	567	anti-parallel
Strand 6	C	42	43	parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	654	660	first strand
Strand 2	B	691	697	parallel
Strand 3	B	670	675	anti-parallel
Strand 4	B	664	667	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	701	704	first strand
Strand 2	C	787	790	parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	712	728	first strand
Strand 2	B	1059	1077	anti-parallel
Strand 3	B	1047	1056	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	712	728	first strand
Strand 2	B	1059	1077	anti-parallel
Strand 3	B	1096	1097	anti-parallel
Strand 4	B	1102	1103	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	733	736	first strand
Strand 2	B	858	861	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1120	1122	first strand
Strand 2	B	1086	1090	anti-parallel
Strand 3	B	1081	1083	anti-parallel
Strand 4	B	1133	1134	parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	29	30	first strand
Strand 2	C	61	62	anti-parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	50	51	first strand
Strand 2	C	275	279	anti-parallel
Strand 3	C	285	290	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	54	55	first strand
Strand 2	C	271	272	anti-parallel

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There are 5 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	224	230	first strand
Strand 2	C	200	208	anti-parallel
Strand 3	C	189	195	anti-parallel
Strand 4	C	90	94	anti-parallel
Strand 5	C	266	269	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	104	106	first strand
Strand 2	C	238	240	anti-parallel

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There are 5 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	311	318	first strand
Strand 2	C	593	599	anti-parallel
Strand 3	C	609	612	anti-parallel
Strand 4	C	648	651	anti-parallel
Strand 5	C	642	645	anti-parallel

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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	378	380	first strand
Strand 2	C	431	434	anti-parallel
Strand 3	C	511	512	anti-parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	539	540	first strand
Strand 2	C	549	553	anti-parallel
Strand 3	C	584	588	anti-parallel
Strand 4	C	575	577	anti-parallel

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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	654	655	first strand
Strand 2	C	692	696	parallel
Strand 3	C	670	674	anti-parallel
Strand 4	C	664	667	anti-parallel

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There are 3 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	715	728	first strand
Strand 2	C	1059	1072	anti-parallel
Strand 3	C	1047	1056	anti-parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	735	736	first strand
Strand 2	C	858	859	anti-parallel

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There are 3 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1076	1077	first strand
Strand 2	C	1094	1097	anti-parallel
Strand 3	C	1102	1105	anti-parallel

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There are 4 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1120	1122	first strand
Strand 2	C	1086	1090	anti-parallel
Strand 3	C	1081	1083	anti-parallel
Strand 4	C	1133	1134	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8USZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
8USZ