Analysis of interatomic Contacts of Structural Units in PDB entry:
8UTV

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8UTV entry

There are 4 chains in PDB entry 8UTV (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
E	MET 1	TYR 451
A	MET 1	VAL 440
B	MET 1	GLY 434
K	ALA 4	ASN 357

There are 71 helices in PDB entry 8UTV. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	E	10	29	Right-handed alpha
Helix 2	AA2	E	37	43	Right-handed alpha
Helix 3	AA3	E	71	81	Right-handed alpha
Helix 4	AA4	E	82	86	Right-handed 310
Helix 5	AA5	E	102	108	Right-handed alpha
Helix 6	AA6	E	113	129	Right-handed alpha
Helix 7	AA7	E	144	161	Right-handed alpha
Helix 8	AA8	E	182	190	Right-handed alpha
Helix 9	AA9	E	190	197	Right-handed alpha
Helix 10	AB1	E	205	216	Right-handed alpha
Helix 11	AB2	E	223	244	Right-handed alpha
Helix 12	AB3	E	251	260	Right-handed alpha
Helix 13	AB4	E	277	282	Right-handed alpha
Helix 14	AB5	E	287	296	Right-handed alpha
Helix 15	AB6	E	297	301	Right-handed 310
Helix 16	AB7	E	306	310	Right-handed 310
Helix 17	AB8	E	324	338	Right-handed alpha
Helix 18	AB9	E	383	400	Right-handed alpha
Helix 19	AC1	E	404	410	Right-handed alpha
Helix 20	AC2	E	416	436	Right-handed alpha
Helix 21	AC3	A	10	29	Right-handed alpha
Helix 22	AC4	A	37	43	Right-handed alpha
Helix 23	AC5	A	71	81	Right-handed alpha
Helix 24	AC6	A	82	86	Right-handed 310
Helix 25	AC7	A	102	108	Right-handed alpha
Helix 26	AC8	A	113	129	Right-handed alpha
Helix 27	AC9	A	144	161	Right-handed alpha
Helix 28	AD1	A	182	190	Right-handed alpha
Helix 29	AD2	A	190	197	Right-handed alpha
Helix 30	AD3	A	206	216	Right-handed alpha
Helix 31	AD4	A	223	244	Right-handed alpha
Helix 32	AD5	A	251	260	Right-handed alpha
Helix 33	AD6	A	277	282	Right-handed alpha
Helix 34	AD7	A	287	296	Right-handed alpha
Helix 35	AD8	A	297	301	Right-handed 310
Helix 36	AD9	A	306	310	Right-handed 310
Helix 37	AE1	A	324	338	Right-handed alpha
Helix 38	AE2	A	383	400	Right-handed alpha
Helix 39	AE3	A	404	410	Right-handed alpha
Helix 40	AE4	A	416	436	Right-handed alpha
Helix 41	AE5	B	10	28	Right-handed alpha
Helix 42	AE6	B	46	49	Right-handed 310
Helix 43	AE7	B	69	78	Right-handed alpha
Helix 44	AE8	B	81	85	Right-handed 310
Helix 45	AE9	B	86	88	Right-handed 310
Helix 46	AF1	B	108	126	Right-handed alpha
Helix 47	AF2	B	142	159	Right-handed alpha
Helix 48	AF3	B	180	193	Right-handed alpha
Helix 49	AF4	B	203	214	Right-handed alpha
Helix 50	AF5	B	221	237	Right-handed alpha
Helix 51	AF6	B	238	241	Right-handed 310
Helix 52	AF7	B	249	258	Right-handed alpha
Helix 53	AF8	B	278	282	Right-handed 310
Helix 54	AF9	B	285	294	Right-handed alpha
Helix 55	AG1	B	295	299	Right-handed 310
Helix 56	AG2	B	304	308	Right-handed 310
Helix 57	AG3	B	322	337	Right-handed alpha
Helix 58	AG4	B	338	341	Right-handed 310
Helix 59	AG5	B	374	390	Right-handed alpha
Helix 60	AG6	B	394	400	Right-handed alpha
Helix 61	AG7	B	404	425	Right-handed alpha
Helix 62	AG8	K	16	22	Right-handed alpha
Helix 63	AG9	K	69	77	Right-handed alpha
Helix 64	AH1	K	77	87	Right-handed alpha
Helix 65	AH2	K	102	108	Right-handed alpha
Helix 66	AH3	K	117	133	Right-handed alpha
Helix 67	AH4	K	188	201	Right-handed alpha
Helix 68	AH5	K	262	296	Right-handed alpha
Helix 69	AH6	K	309	315	Right-handed alpha
Helix 70	AH7	K	315	320	Right-handed alpha
Helix 71	AH8	K	337	350	Right-handed alpha

There are 14 sheets in PDB entry 8UTV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	65	68	first strand
Strand 2	E	3	9	parallel
Strand 3	E	132	140	parallel
Strand 4	E	165	171	parallel
Strand 5	E	200	204	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	53	55	first strand
Strand 2	E	61	63	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	269	272	first strand
Strand 2	E	373	381	anti-parallel
Strand 3	E	312	321	anti-parallel
Strand 4	E	351	356	parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	65	68	first strand
Strand 2	A	3	9	parallel
Strand 3	A	132	140	parallel
Strand 4	A	165	172	parallel
Strand 5	A	200	205	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	53	55	first strand
Strand 2	A	61	63	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	269	272	first strand
Strand 2	A	373	381	anti-parallel
Strand 3	A	312	321	anti-parallel
Strand 4	A	351	356	parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	90	91	first strand
Strand 2	B	63	66	parallel
Strand 3	B	3	9	parallel
Strand 4	B	130	138	parallel
Strand 5	B	163	169	parallel
Strand 6	B	200	202	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	51	54	first strand
Strand 2	B	58	61	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	267	271	first strand
Strand 2	B	364	371	anti-parallel
Strand 3	B	310	318	anti-parallel
Strand 4	B	349	354	parallel

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There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	54	56	first strand
Strand 2	K	6	12	parallel
Strand 3	K	324	331	parallel
Strand 4	K	91	96	parallel
Strand 5	K	241	248	parallel
Strand 6	K	218	229	anti-parallel
Strand 7	K	138	150	anti-parallel
Strand 8	K	153	156	anti-parallel

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There are 8 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	54	56	first strand
Strand 2	K	6	12	parallel
Strand 3	K	324	331	parallel
Strand 4	K	91	96	parallel
Strand 5	K	241	248	parallel
Strand 6	K	218	229	anti-parallel
Strand 7	K	138	150	anti-parallel
Strand 8	K	184	185	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	28	31	first strand
Strand 2	K	34	37	anti-parallel
Strand 3	K	48	51	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	168	171	first strand
Strand 2	K	175	178	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	205	206	first strand
Strand 2	K	214	215	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8UTV

Analysis of interatomic Contacts of Structural Units in PDB entry:
8UTV