Analysis of interatomic Contacts of Structural Units in PDB entry:
8UUC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8UUC entry

There are 5 chains in PDB entry 8UUC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 0ALA 273
B
 A 1 C 5
B
 T 7 C 11
C
 T 1 A 6
C
 G 8 T 11
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 8UUC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 15Right-handed alpha
Helix 2
AA2
A
25 37Right-handed alpha
Helix 3
AA3
A
40 55Right-handed alpha
Helix 4
AA4
A
57 64Right-handed alpha
Helix 5
AA5
A
65 74Right-handed alpha
Helix 6
AA6
A
79 96Right-handed alpha
Helix 7
AA7
A
103 109Right-handed alpha
Helix 8
AA8
A
114 127Right-handed alpha
Helix 9
AA9
A
134 146Right-handed alpha
Helix 10
AB1
A
153 165Right-handed alpha
Helix 11
AB2
A
169 188Right-handed alpha
Helix 12
AB3
A
190 195Right-handed 310
Helix 13
AB4
A
207 222Right-handed alpha
Helix 14
AB5
A
227 241Right-handed alpha
Helix 15
AB6
A
247 262Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8UUC.

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
225 226first strand
Strand 2
A
270 272anti-parallel
Strand 3
A
265 267anti-parallel
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