Analysis of interatomic Contacts of Structural Units in PDB entry:
8UUT

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8UUT entry

There are 6 chains in PDB entry 8UUT (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 43	PRO 161
B	ASN 43	PRO 161
C	ASN 43	PRO 161
D	ASN 43	PRO 161
E	ASN 43	PRO 161
F	ASN 43	PRO 161

There are 7 helices in PDB entry 8UUT. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	50	61	Right-handed alpha
Helix 2	AA2	A	97	101	Right-handed 310
Helix 3	AA3	B	50	61	Right-handed alpha
Helix 4	AA4	C	50	61	Right-handed alpha
Helix 5	AA5	D	50	61	Right-handed alpha
Helix 6	AA6	E	50	61	Right-handed alpha
Helix 7	AA7	F	50	61	Right-handed alpha

There are 18 sheets in PDB entry 8UUT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	110	115	first strand
Strand 2	A	120	127	anti-parallel
Strand 3	A	81	88	anti-parallel
Strand 4	A	71	78	anti-parallel
Strand 5	A	64	68	anti-parallel
Strand 6	A	158	159	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	93	94	first strand
Strand 2	A	137	143	anti-parallel
Strand 3	A	102	103	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	93	94	first strand
Strand 2	A	137	143	anti-parallel
Strand 3	A	150	156	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	110	116	first strand
Strand 2	B	119	127	anti-parallel
Strand 3	B	81	88	anti-parallel
Strand 4	B	71	78	anti-parallel
Strand 5	B	64	68	anti-parallel
Strand 6	B	158	159	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	93	94	first strand
Strand 2	B	137	144	anti-parallel
Strand 3	B	102	103	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	93	94	first strand
Strand 2	B	137	144	anti-parallel
Strand 3	B	149	156	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	110	115	first strand
Strand 2	C	120	127	anti-parallel
Strand 3	C	81	88	anti-parallel
Strand 4	C	71	78	anti-parallel
Strand 5	C	64	68	anti-parallel
Strand 6	C	158	159	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	92	94	first strand
Strand 2	C	137	144	anti-parallel
Strand 3	C	102	103	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	92	94	first strand
Strand 2	C	137	144	anti-parallel
Strand 3	C	150	156	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	110	115	first strand
Strand 2	D	120	127	anti-parallel
Strand 3	D	81	88	anti-parallel
Strand 4	D	71	78	anti-parallel
Strand 5	D	64	68	anti-parallel
Strand 6	D	158	159	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	93	94	first strand
Strand 2	D	137	143	anti-parallel
Strand 3	D	102	103	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	93	94	first strand
Strand 2	D	137	143	anti-parallel
Strand 3	D	150	156	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	110	116	first strand
Strand 2	E	119	127	anti-parallel
Strand 3	E	81	88	anti-parallel
Strand 4	E	71	78	anti-parallel
Strand 5	E	64	68	anti-parallel
Strand 6	E	158	159	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	92	94	first strand
Strand 2	E	137	144	anti-parallel
Strand 3	E	102	103	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	92	94	first strand
Strand 2	E	137	144	anti-parallel
Strand 3	E	151	156	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	110	116	first strand
Strand 2	F	119	127	anti-parallel
Strand 3	F	81	88	anti-parallel
Strand 4	F	71	78	anti-parallel
Strand 5	F	64	68	anti-parallel
Strand 6	F	158	159	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	93	94	first strand
Strand 2	F	137	144	anti-parallel
Strand 3	F	102	103	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	93	94	first strand
Strand 2	F	137	144	anti-parallel
Strand 3	F	149	156	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8UUT

Analysis of interatomic Contacts of Structural Units in PDB entry:
8UUT