Analysis of interatomic Contacts of Structural Units in PDB entry:
8UUW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8UUW entry

There is 1 chain in PDB entry 8UUW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 8ILE 314
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 8UUW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
26 32Right-handed alpha
Helix 2
AA2
A
61 73Right-handed alpha
Helix 3
AA3
A
77 91Right-handed alpha
Helix 4
AA4
A
110 123Right-handed alpha
Helix 5
AA5
A
129 142Right-handed alpha
Helix 6
AA6
A
144 155Right-handed alpha
Helix 7
AA7
A
164 175Right-handed alpha
Helix 8
AA8
A
201 205Right-handed alpha
Helix 9
AA9
A
212 219Right-handed alpha
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There are 5 sheets in PDB entry 8UUW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 17first strand
Strand 2
A
9 10anti-parallel
Strand 3
A
55 57parallel
Strand 4
A
34 36anti-parallel
Strand 5
A
39 40anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
97 98first strand
Strand 2
A
101 102anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
195 200first strand
Strand 2
A
182 188anti-parallel
Strand 3
A
231 238anti-parallel
Strand 4
A
220 221anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
195 200first strand
Strand 2
A
182 188anti-parallel
Strand 3
A
231 238anti-parallel
Strand 4
A
310 311anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
206 208first strand
Strand 2
A
242 253parallel
Strand 3
A
296 305anti-parallel
Strand 4
A
260 265anti-parallel
Strand 5
A
272 278anti-parallel
Strand 6
A
282 286anti-parallel
Strand 7
A
289 293anti-parallel
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