Analysis of interatomic Contacts of Structural Units in PDB entry:
8UVQ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8UVQ entry

There are 6 chains in PDB entry 8UVQ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 22	ARG 772
B	ARG 22	ARG 772
C	ARG 22	ARG 772
D	ARG 22	ARG 772
E	ARG 22	ARG 772
F	ARG 22	ARG 772

There are210 helices in PDB entry 8UVQ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	42	50	Right-handed alpha
Helix 2	AA2	A	75	78	Right-handed 310
Helix 3	AA3	A	85	92	Right-handed alpha
Helix 4	AA4	A	129	134	Right-handed alpha
Helix 5	AA5	A	202	206	Right-handed 310
Helix 6	AA6	A	209	226	Right-handed alpha
Helix 7	AA7	A	228	232	Right-handed 310
Helix 8	AA8	A	250	262	Right-handed alpha
Helix 9	AA9	A	270	276	Right-handed alpha
Helix 10	AB1	A	280	296	Right-handed alpha
Helix 11	AB2	A	305	310	Right-handed alpha
Helix 12	AB3	A	312	316	Right-handed 310
Helix 13	AB4	A	319	333	Right-handed alpha
Helix 14	AB5	A	349	353	Right-handed 310
Helix 15	AB6	A	354	359	Right-handed 310
Helix 16	AB7	A	373	385	Right-handed alpha
Helix 17	AB8	A	396	403	Right-handed alpha
Helix 18	AB9	A	407	425	Right-handed alpha
Helix 19	AC1	A	439	445	Right-handed 310
Helix 20	AC2	A	448	458	Right-handed alpha
Helix 21	AC3	A	483	499	Right-handed alpha
Helix 22	AC4	A	499	507	Right-handed alpha
Helix 23	AC5	A	523	535	Right-handed alpha
Helix 24	AC6	A	543	553	Right-handed alpha
Helix 25	AC7	A	557	568	Right-handed alpha
Helix 26	AC8	A	580	585	Right-handed alpha
Helix 27	AC9	A	598	611	Right-handed alpha
Helix 28	AD1	A	612	614	Right-handed 310
Helix 29	AD2	A	625	629	Right-handed 310
Helix 30	AD3	A	649	662	Right-handed alpha
Helix 31	AD4	A	671	679	Right-handed alpha
Helix 32	AD5	A	683	715	Right-handed alpha
Helix 33	AD6	A	732	742	Right-handed alpha
Helix 34	AD7	A	748	760	Right-handed alpha
Helix 35	AD8	A	761	763	Right-handed 310
Helix 36	AD9	B	42	50	Right-handed alpha
Helix 37	AE1	B	75	78	Right-handed 310
Helix 38	AE2	B	85	92	Right-handed alpha
Helix 39	AE3	B	129	134	Right-handed alpha
Helix 40	AE4	B	202	206	Right-handed 310
Helix 41	AE5	B	209	226	Right-handed alpha
Helix 42	AE6	B	226	231	Right-handed alpha
Helix 43	AE7	B	250	262	Right-handed alpha
Helix 44	AE8	B	270	276	Right-handed alpha
Helix 45	AE9	B	280	296	Right-handed alpha
Helix 46	AF1	B	305	310	Right-handed alpha
Helix 47	AF2	B	312	316	Right-handed 310
Helix 48	AF3	B	319	333	Right-handed alpha
Helix 49	AF4	B	349	353	Right-handed 310
Helix 50	AF5	B	354	359	Right-handed 310
Helix 51	AF6	B	373	385	Right-handed alpha
Helix 52	AF7	B	396	403	Right-handed alpha
Helix 53	AF8	B	407	425	Right-handed alpha
Helix 54	AF9	B	439	445	Right-handed 310
Helix 55	AG1	B	448	458	Right-handed alpha
Helix 56	AG2	B	483	499	Right-handed alpha
Helix 57	AG3	B	499	507	Right-handed alpha
Helix 58	AG4	B	523	535	Right-handed alpha
Helix 59	AG5	B	543	553	Right-handed alpha
Helix 60	AG6	B	557	568	Right-handed alpha
Helix 61	AG7	B	580	585	Right-handed alpha
Helix 62	AG8	B	598	611	Right-handed alpha
Helix 63	AG9	B	612	614	Right-handed 310
Helix 64	AH1	B	625	629	Right-handed 310
Helix 65	AH2	B	649	662	Right-handed alpha
Helix 66	AH3	B	671	679	Right-handed alpha
Helix 67	AH4	B	683	715	Right-handed alpha
Helix 68	AH5	B	732	742	Right-handed alpha
Helix 69	AH6	B	748	760	Right-handed alpha
Helix 70	AH7	B	761	763	Right-handed 310
Helix 71	AH8	C	42	50	Right-handed alpha
Helix 72	AH9	C	75	78	Right-handed 310
Helix 73	AI1	C	85	92	Right-handed alpha
Helix 74	AI2	C	129	134	Right-handed alpha
Helix 75	AI3	C	202	206	Right-handed 310
Helix 76	AI4	C	209	226	Right-handed alpha
Helix 77	AI5	C	228	232	Right-handed 310
Helix 78	AI6	C	250	262	Right-handed alpha
Helix 79	AI7	C	270	276	Right-handed alpha
Helix 80	AI8	C	280	296	Right-handed alpha
Helix 81	AI9	C	305	310	Right-handed alpha
Helix 82	AJ1	C	312	316	Right-handed 310
Helix 83	AJ2	C	319	333	Right-handed alpha
Helix 84	AJ3	C	349	353	Right-handed 310
Helix 85	AJ4	C	354	359	Right-handed 310
Helix 86	AJ5	C	373	385	Right-handed alpha
Helix 87	AJ6	C	396	403	Right-handed alpha
Helix 88	AJ7	C	407	425	Right-handed alpha
Helix 89	AJ8	C	439	445	Right-handed 310
Helix 90	AJ9	C	448	458	Right-handed alpha
Helix 91	AK1	C	483	499	Right-handed alpha
Helix 92	AK2	C	499	507	Right-handed alpha
Helix 93	AK3	C	523	535	Right-handed alpha
Helix 94	AK4	C	543	553	Right-handed alpha
Helix 95	AK5	C	557	568	Right-handed alpha
Helix 96	AK6	C	580	585	Right-handed alpha
Helix 97	AK7	C	598	611	Right-handed alpha
Helix 98	AK8	C	612	614	Right-handed 310
Helix 99	AK9	C	625	629	Right-handed 310
Helix 100	AL1	C	649	662	Right-handed alpha
Helix 101	AL2	C	671	679	Right-handed alpha
Helix 102	AL3	C	683	715	Right-handed alpha
Helix 103	AL4	C	732	742	Right-handed alpha
Helix 104	AL5	C	748	760	Right-handed alpha
Helix 105	AL6	C	761	763	Right-handed 310
Helix 106	AL7	D	42	50	Right-handed alpha
Helix 107	AL8	D	75	78	Right-handed 310
Helix 108	AL9	D	85	92	Right-handed alpha
Helix 109	AM1	D	129	134	Right-handed alpha
Helix 110	AM2	D	202	206	Right-handed 310
Helix 111	AM3	D	209	226	Right-handed alpha
Helix 112	AM4	D	228	232	Right-handed 310
Helix 113	AM5	D	250	262	Right-handed alpha
Helix 114	AM6	D	270	276	Right-handed alpha
Helix 115	AM7	D	280	296	Right-handed alpha
Helix 116	AM8	D	305	310	Right-handed alpha
Helix 117	AM9	D	312	316	Right-handed 310
Helix 118	AN1	D	319	333	Right-handed alpha
Helix 119	AN2	D	349	353	Right-handed 310
Helix 120	AN3	D	354	359	Right-handed 310
Helix 121	AN4	D	373	385	Right-handed alpha
Helix 122	AN5	D	396	403	Right-handed alpha
Helix 123	AN6	D	407	425	Right-handed alpha
Helix 124	AN7	D	439	445	Right-handed 310
Helix 125	AN8	D	448	458	Right-handed alpha
Helix 126	AN9	D	483	499	Right-handed alpha
Helix 127	AO1	D	499	507	Right-handed alpha
Helix 128	AO2	D	523	535	Right-handed alpha
Helix 129	AO3	D	543	553	Right-handed alpha
Helix 130	AO4	D	557	568	Right-handed alpha
Helix 131	AO5	D	580	585	Right-handed alpha
Helix 132	AO6	D	598	611	Right-handed alpha
Helix 133	AO7	D	612	614	Right-handed 310
Helix 134	AO8	D	625	629	Right-handed 310
Helix 135	AO9	D	649	662	Right-handed alpha
Helix 136	AP1	D	671	679	Right-handed alpha
Helix 137	AP2	D	683	715	Right-handed alpha
Helix 138	AP3	D	732	742	Right-handed alpha
Helix 139	AP4	D	748	760	Right-handed alpha
Helix 140	AP5	D	761	763	Right-handed 310
Helix 141	AP6	E	42	50	Right-handed alpha
Helix 142	AP7	E	75	78	Right-handed 310
Helix 143	AP8	E	85	92	Right-handed alpha
Helix 144	AP9	E	129	134	Right-handed alpha
Helix 145	AQ1	E	202	206	Right-handed 310
Helix 146	AQ2	E	209	226	Right-handed alpha
Helix 147	AQ3	E	226	231	Right-handed alpha
Helix 148	AQ4	E	250	262	Right-handed alpha
Helix 149	AQ5	E	270	276	Right-handed alpha
Helix 150	AQ6	E	280	296	Right-handed alpha
Helix 151	AQ7	E	305	310	Right-handed alpha
Helix 152	AQ8	E	312	316	Right-handed 310
Helix 153	AQ9	E	319	333	Right-handed alpha
Helix 154	AR1	E	349	353	Right-handed 310
Helix 155	AR2	E	354	359	Right-handed 310
Helix 156	AR3	E	373	385	Right-handed alpha
Helix 157	AR4	E	396	403	Right-handed alpha
Helix 158	AR5	E	407	425	Right-handed alpha
Helix 159	AR6	E	439	445	Right-handed 310
Helix 160	AR7	E	448	458	Right-handed alpha
Helix 161	AR8	E	483	499	Right-handed alpha
Helix 162	AR9	E	499	507	Right-handed alpha
Helix 163	AS1	E	523	535	Right-handed alpha
Helix 164	AS2	E	543	553	Right-handed alpha
Helix 165	AS3	E	557	568	Right-handed alpha
Helix 166	AS4	E	580	585	Right-handed alpha
Helix 167	AS5	E	598	611	Right-handed alpha
Helix 168	AS6	E	612	614	Right-handed 310
Helix 169	AS7	E	625	629	Right-handed 310
Helix 170	AS8	E	649	662	Right-handed alpha
Helix 171	AS9	E	671	679	Right-handed alpha
Helix 172	AT1	E	683	715	Right-handed alpha
Helix 173	AT2	E	732	742	Right-handed alpha
Helix 174	AT3	E	748	760	Right-handed alpha
Helix 175	AT4	E	761	763	Right-handed 310
Helix 176	AT5	F	42	50	Right-handed alpha
Helix 177	AT6	F	75	78	Right-handed 310
Helix 178	AT7	F	85	92	Right-handed alpha
Helix 179	AT8	F	129	134	Right-handed alpha
Helix 180	AT9	F	202	206	Right-handed 310
Helix 181	AU1	F	209	226	Right-handed alpha
Helix 182	AU2	F	228	232	Right-handed 310
Helix 183	AU3	F	250	262	Right-handed alpha
Helix 184	AU4	F	270	276	Right-handed alpha
Helix 185	AU5	F	280	296	Right-handed alpha
Helix 186	AU6	F	305	310	Right-handed alpha
Helix 187	AU7	F	312	316	Right-handed 310
Helix 188	AU8	F	319	333	Right-handed alpha
Helix 189	AU9	F	349	353	Right-handed 310
Helix 190	AV1	F	354	359	Right-handed 310
Helix 191	AV2	F	373	385	Right-handed alpha
Helix 192	AV3	F	396	403	Right-handed alpha
Helix 193	AV4	F	407	425	Right-handed alpha
Helix 194	AV5	F	439	445	Right-handed 310
Helix 195	AV6	F	448	458	Right-handed alpha
Helix 196	AV7	F	483	499	Right-handed alpha
Helix 197	AV8	F	499	507	Right-handed alpha
Helix 198	AV9	F	523	535	Right-handed alpha
Helix 199	AW1	F	543	553	Right-handed alpha
Helix 200	AW2	F	557	568	Right-handed alpha
Helix 201	AW3	F	580	585	Right-handed alpha
Helix 202	AW4	F	598	611	Right-handed alpha
Helix 203	AW5	F	612	614	Right-handed 310
Helix 204	AW6	F	625	629	Right-handed 310
Helix 205	AW7	F	649	662	Right-handed alpha
Helix 206	AW8	F	671	679	Right-handed alpha
Helix 207	AW9	F	683	715	Right-handed alpha
Helix 208	AX1	F	732	742	Right-handed alpha
Helix 209	AX2	F	748	760	Right-handed alpha
Helix 210	AX3	F	761	763	Right-handed 310

There are 24 sheets in PDB entry 8UVQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	66	67	first strand
Strand 2	A	59	60	anti-parallel
Strand 3	A	99	102	anti-parallel
Strand 4	A	25	29	anti-parallel
Strand 5	A	81	84	parallel
Strand 6	A	38	41	anti-parallel
Strand 7	A	70	73	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	115	118	first strand
Strand 2	A	162	167	anti-parallel
Strand 3	A	150	153	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	240	244	first strand
Strand 2	A	342	347	parallel
Strand 3	A	300	303	parallel
Strand 4	A	266	268	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	575	576	first strand
Strand 2	A	620	623	parallel
Strand 3	A	514	517	parallel
Strand 4	A	641	644	parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	66	67	first strand
Strand 2	B	59	60	anti-parallel
Strand 3	B	99	102	anti-parallel
Strand 4	B	25	29	anti-parallel
Strand 5	B	81	84	parallel
Strand 6	B	38	41	anti-parallel
Strand 7	B	70	73	parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	115	118	first strand
Strand 2	B	162	167	anti-parallel
Strand 3	B	150	153	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	240	244	first strand
Strand 2	B	342	347	parallel
Strand 3	B	300	303	parallel
Strand 4	B	266	268	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	575	576	first strand
Strand 2	B	620	623	parallel
Strand 3	B	514	517	parallel
Strand 4	B	641	644	parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	66	67	first strand
Strand 2	C	59	60	anti-parallel
Strand 3	C	99	102	anti-parallel
Strand 4	C	25	29	anti-parallel
Strand 5	C	81	84	parallel
Strand 6	C	38	41	anti-parallel
Strand 7	C	70	73	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	115	118	first strand
Strand 2	C	162	167	anti-parallel
Strand 3	C	150	153	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	240	244	first strand
Strand 2	C	342	347	parallel
Strand 3	C	300	303	parallel
Strand 4	C	266	268	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	575	576	first strand
Strand 2	C	620	623	parallel
Strand 3	C	514	517	parallel
Strand 4	C	641	644	parallel

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There are 7 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	66	67	first strand
Strand 2	D	59	60	anti-parallel
Strand 3	D	99	102	anti-parallel
Strand 4	D	25	29	anti-parallel
Strand 5	D	81	84	parallel
Strand 6	D	38	41	anti-parallel
Strand 7	D	70	73	parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	115	118	first strand
Strand 2	D	162	167	anti-parallel
Strand 3	D	150	153	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	240	244	first strand
Strand 2	D	342	347	parallel
Strand 3	D	300	303	parallel
Strand 4	D	266	268	parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	575	576	first strand
Strand 2	D	620	623	parallel
Strand 3	D	514	517	parallel
Strand 4	D	641	644	parallel

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There are 7 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	66	67	first strand
Strand 2	E	59	60	anti-parallel
Strand 3	E	99	102	anti-parallel
Strand 4	E	25	29	anti-parallel
Strand 5	E	81	84	parallel
Strand 6	E	38	41	anti-parallel
Strand 7	E	70	73	parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	115	118	first strand
Strand 2	E	162	167	anti-parallel
Strand 3	E	150	153	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	240	244	first strand
Strand 2	E	342	347	parallel
Strand 3	E	300	303	parallel
Strand 4	E	266	268	parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	575	576	first strand
Strand 2	E	620	623	parallel
Strand 3	E	514	517	parallel
Strand 4	E	641	644	parallel

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There are 7 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	66	67	first strand
Strand 2	F	59	60	anti-parallel
Strand 3	F	99	102	anti-parallel
Strand 4	F	25	29	anti-parallel
Strand 5	F	81	84	parallel
Strand 6	F	38	41	anti-parallel
Strand 7	F	70	73	parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	115	118	first strand
Strand 2	F	162	167	anti-parallel
Strand 3	F	150	153	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	240	244	first strand
Strand 2	F	342	347	parallel
Strand 3	F	300	303	parallel
Strand 4	F	266	268	parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	575	576	first strand
Strand 2	F	620	623	parallel
Strand 3	F	514	517	parallel
Strand 4	F	641	644	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8UVQ

Analysis of interatomic Contacts of Structural Units in PDB entry:
8UVQ