Analysis of interatomic Contacts of Structural Units in PDB entry:
8UW2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8UW2 entry

There are 2 chains in PDB entry 8UW2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 4TYR 437
B
 GLN 1VAL 114
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 8UW2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
52 56Right-handed 310
Helix 2
AA2
A
92 122Right-handed alpha
Helix 3
AA3
A
146 148Right-handed 310
Helix 4
AA4
A
183 187Right-handed alpha
Helix 5
AA5
A
200 204Right-handed 310
Helix 6
AA6
A
234 243Right-handed alpha
Helix 7
AA7
A
246 268Right-handed alpha
Helix 8
AA8
A
276 278Right-handed 310
Helix 9
AA9
A
317 322Right-handed alpha
Helix 10
AB1
A
328 345Right-handed alpha
Helix 11
AB2
A
353 364Right-handed alpha
Helix 12
AB3
A
373 384Right-handed alpha
Helix 13
AB4
A
398 404Right-handed alpha
Helix 14
AB5
A
405 409Right-handed 310
Helix 15
AB6
A
412 418Right-handed alpha
Helix 16
AB7
B
28 32Right-handed 310
Helix 17
AB8
B
61 64Right-handed 310
Helix 18
AB9
B
86 90Right-handed 310
Helix 19
AC1
B
98 103Right-handed alpha
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There are 5 sheets in PDB entry 8UW2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 38first strand
Strand 2
A
22 30anti-parallel
Strand 3
A
6 15anti-parallel
Strand 4
A
82 89anti-parallel
Strand 5
A
72 79anti-parallel
Strand 6
A
61 65anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
150 158first strand
Strand 2
A
162 169anti-parallel
Strand 3
A
175 182anti-parallel
Strand 4
A
222 228anti-parallel
Strand 5
A
213 218anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
280 282first strand
Strand 2
A
288 290anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 7first strand
Strand 2
B
18 25anti-parallel
Strand 3
B
77 82anti-parallel
Strand 4
B
67 72anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 11first strand
Strand 2
B
110 113parallel
Strand 3
B
91 97anti-parallel
Strand 4
B
34 39anti-parallel
Strand 5
B
46 51anti-parallel
Strand 6
B
57 59anti-parallel
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