Analysis of interatomic Contacts of Structural Units in PDB entry:
8UWB

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8UWB entry

There are 3 chains in PDB entry 8UWB (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	ALA 589
B	THR 46	LEU 455
C	MET 1	ASN 249

There are174 helices in PDB entry 8UWB. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	13	21	Right-handed alpha
Helix 2	AA2	A	24	34	Right-handed alpha
Helix 3	AA3	A	36	43	Right-handed alpha
Helix 4	AA4	A	43	51	Right-handed alpha
Helix 5	AA5	A	51	58	Right-handed alpha
Helix 6	AA6	A	62	74	Right-handed alpha
Helix 7	AA7	A	81	88	Right-handed 310
Helix 8	AA8	A	89	98	Right-handed alpha
Helix 9	AA9	A	101	116	Right-handed alpha
Helix 10	AB1	A	120	127	Right-handed alpha
Helix 11	AB2	A	127	136	Right-handed alpha
Helix 12	AB3	A	140	148	Right-handed alpha
Helix 13	AB4	A	150	155	Right-handed alpha
Helix 14	AB5	A	161	175	Right-handed alpha
Helix 15	AB6	A	178	194	Right-handed alpha
Helix 16	AB7	A	197	202	Right-handed alpha
Helix 17	AB8	A	204	214	Right-handed alpha
Helix 18	AB9	A	217	233	Right-handed alpha
Helix 19	AC1	A	239	244	Right-handed alpha
Helix 20	AC2	A	244	253	Right-handed alpha
Helix 21	AC3	A	256	266	Right-handed alpha
Helix 22	AC4	A	266	275	Right-handed alpha
Helix 23	AC5	A	276	282	Right-handed alpha
Helix 24	AC6	A	282	292	Right-handed alpha
Helix 25	AC7	A	295	305	Right-handed alpha
Helix 26	AC8	A	305	311	Right-handed alpha
Helix 27	AC9	A	317	325	Right-handed alpha
Helix 28	AD1	A	326	335	Right-handed alpha
Helix 29	AD2	A	338	350	Right-handed alpha
Helix 30	AD3	A	352	357	Right-handed alpha
Helix 31	AD4	A	357	365	Right-handed alpha
Helix 32	AD5	A	365	374	Right-handed alpha
Helix 33	AD6	A	377	387	Right-handed alpha
Helix 34	AD7	A	387	395	Right-handed alpha
Helix 35	AD8	A	396	404	Right-handed alpha
Helix 36	AD9	A	404	412	Right-handed alpha
Helix 37	AE1	A	416	435	Right-handed alpha
Helix 38	AE2	A	435	442	Right-handed alpha
Helix 39	AE3	A	443	450	Right-handed alpha
Helix 40	AE4	A	451	453	Right-handed 310
Helix 41	AE5	A	455	474	Right-handed alpha
Helix 42	AE6	A	474	489	Right-handed alpha
Helix 43	AE7	A	490	492	Right-handed 310
Helix 44	AE8	A	494	520	Right-handed alpha
Helix 45	AE9	A	521	529	Right-handed alpha
Helix 46	AF1	A	533	548	Right-handed alpha
Helix 47	AF2	A	549	551	Right-handed 310
Helix 48	AF3	A	552	559	Right-handed alpha
Helix 49	AF4	A	559	568	Right-handed alpha
Helix 50	AF5	A	572	586	Right-handed alpha
Helix 51	AF6	B	50	54	Right-handed 310
Helix 52	AF7	B	58	70	Right-handed alpha
Helix 53	AF8	B	82	100	Right-handed alpha
Helix 54	AF9	B	110	124	Right-handed alpha
Helix 55	AG1	B	147	163	Right-handed alpha
Helix 56	AG2	B	168	173	Right-handed alpha
Helix 57	AG3	B	177	187	Right-handed alpha
Helix 58	AG4	B	188	190	Right-handed 310
Helix 59	AG5	B	192	210	Right-handed alpha
Helix 60	AG6	B	213	231	Right-handed alpha
Helix 61	AG7	B	237	251	Right-handed alpha
Helix 62	AG8	B	257	267	Right-handed alpha
Helix 63	AG9	B	269	279	Right-handed 310
Helix 64	AH1	B	280	295	Right-handed alpha
Helix 65	AH2	B	298	309	Right-handed alpha
Helix 66	AH3	B	314	331	Right-handed alpha
Helix 67	AH4	B	333	339	Right-handed alpha
Helix 68	AH5	B	340	353	Right-handed alpha
Helix 69	AH6	B	356	365	Right-handed alpha
Helix 70	AH7	B	366	368	Right-handed 310
Helix 71	AH8	B	369	379	Right-handed alpha
Helix 72	AH9	B	379	398	Right-handed alpha
Helix 73	AI1	B	400	417	Right-handed alpha
Helix 74	AI2	B	418	428	Right-handed alpha
Helix 75	AI3	B	429	455	Right-handed alpha
Helix 76	AI4	C	2	18	Right-handed alpha
Helix 77	AI5	C	24	40	Right-handed alpha
Helix 78	AI6	C	61	73	Right-handed alpha
Helix 79	AI7	C	92	107	Right-handed alpha
Helix 80	AI8	C	120	127	Right-handed alpha
Helix 81	AI9	C	128	138	Right-handed alpha
Helix 82	AJ1	C	140	151	Right-handed alpha
Helix 83	AJ2	C	176	183	Right-handed alpha
Helix 84	AJ3	C	193	201	Right-handed alpha
Helix 85	AJ4	C	221	233	Right-handed alpha
Helix 86	AJ5	C	264	268	Right-handed 310
Helix 87	AJ6	D	24	34	Right-handed alpha
Helix 88	AJ7	D	36	43	Right-handed alpha
Helix 89	AJ8	D	43	50	Right-handed alpha
Helix 90	AJ9	D	50	59	Right-handed alpha
Helix 91	AK1	D	62	74	Right-handed alpha
Helix 92	AK2	D	76	81	Right-handed alpha
Helix 93	AK3	D	85	88	Right-handed 310
Helix 94	AK4	D	89	98	Right-handed alpha
Helix 95	AK5	D	101	116	Right-handed alpha
Helix 96	AK6	D	120	127	Right-handed alpha
Helix 97	AK7	D	127	136	Right-handed alpha
Helix 98	AK8	D	140	148	Right-handed alpha
Helix 99	AK9	D	150	155	Right-handed alpha
Helix 100	AL1	D	161	175	Right-handed alpha
Helix 101	AL2	D	178	188	Right-handed alpha
Helix 102	AL3	D	188	194	Right-handed alpha
Helix 103	AL4	D	197	202	Right-handed alpha
Helix 104	AL5	D	204	213	Right-handed alpha
Helix 105	AL6	D	217	233	Right-handed alpha
Helix 106	AL7	D	236	244	Right-handed alpha
Helix 107	AL8	D	244	253	Right-handed alpha
Helix 108	AL9	D	256	266	Right-handed alpha
Helix 109	AM1	D	266	275	Right-handed alpha
Helix 110	AM2	D	275	282	Right-handed alpha
Helix 111	AM3	D	282	292	Right-handed alpha
Helix 112	AM4	D	295	305	Right-handed alpha
Helix 113	AM5	D	305	312	Right-handed alpha
Helix 114	AM6	D	317	325	Right-handed alpha
Helix 115	AM7	D	326	334	Right-handed alpha
Helix 116	AM8	D	338	347	Right-handed alpha
Helix 117	AM9	D	348	351	Right-handed 310
Helix 118	AN1	D	352	357	Right-handed alpha
Helix 119	AN2	D	357	364	Right-handed alpha
Helix 120	AN3	D	364	374	Right-handed alpha
Helix 121	AN4	D	377	387	Right-handed alpha
Helix 122	AN5	D	387	395	Right-handed alpha
Helix 123	AN6	D	396	404	Right-handed alpha
Helix 124	AN7	D	404	412	Right-handed alpha
Helix 125	AN8	D	416	435	Right-handed alpha
Helix 126	AN9	D	435	442	Right-handed alpha
Helix 127	AO1	D	443	450	Right-handed alpha
Helix 128	AO2	D	451	453	Right-handed 310
Helix 129	AO3	D	455	474	Right-handed alpha
Helix 130	AO4	D	474	489	Right-handed alpha
Helix 131	AO5	D	490	492	Right-handed 310
Helix 132	AO6	D	494	520	Right-handed alpha
Helix 133	AO7	D	521	528	Right-handed alpha
Helix 134	AO8	D	529	531	Right-handed 310
Helix 135	AO9	D	533	548	Right-handed alpha
Helix 136	AP1	D	549	551	Right-handed 310
Helix 137	AP2	D	552	568	Right-handed alpha
Helix 138	AP3	D	572	586	Right-handed alpha
Helix 139	AP4	E	58	71	Right-handed alpha
Helix 140	AP5	E	82	100	Right-handed alpha
Helix 141	AP6	E	110	124	Right-handed alpha
Helix 142	AP7	E	136	140	Right-handed 310
Helix 143	AP8	E	147	163	Right-handed alpha
Helix 144	AP9	E	168	173	Right-handed alpha
Helix 145	AQ1	E	177	187	Right-handed alpha
Helix 146	AQ2	E	188	190	Right-handed 310
Helix 147	AQ3	E	192	210	Right-handed alpha
Helix 148	AQ4	E	213	231	Right-handed alpha
Helix 149	AQ5	E	237	251	Right-handed alpha
Helix 150	AQ6	E	257	267	Right-handed alpha
Helix 151	AQ7	E	269	279	Right-handed 310
Helix 152	AQ8	E	280	295	Right-handed alpha
Helix 153	AQ9	E	298	309	Right-handed alpha
Helix 154	AR1	E	314	331	Right-handed alpha
Helix 155	AR2	E	333	339	Right-handed alpha
Helix 156	AR3	E	340	353	Right-handed alpha
Helix 157	AR4	E	356	365	Right-handed alpha
Helix 158	AR5	E	366	368	Right-handed 310
Helix 159	AR6	E	369	379	Right-handed alpha
Helix 160	AR7	E	379	398	Right-handed alpha
Helix 161	AR8	E	400	417	Right-handed alpha
Helix 162	AR9	E	418	428	Right-handed alpha
Helix 163	AS1	E	429	451	Right-handed alpha
Helix 164	AS2	F	2	18	Right-handed alpha
Helix 165	AS3	F	24	40	Right-handed alpha
Helix 166	AS4	F	61	73	Right-handed alpha
Helix 167	AS5	F	92	107	Right-handed alpha
Helix 168	AS6	F	120	127	Right-handed alpha
Helix 169	AS7	F	128	138	Right-handed alpha
Helix 170	AS8	F	140	151	Right-handed alpha
Helix 171	AS9	F	176	183	Right-handed alpha
Helix 172	AT1	F	193	201	Right-handed alpha
Helix 173	AT2	F	221	233	Right-handed alpha
Helix 174	AT3	F	264	268	Right-handed 310

There are 6 sheets in PDB entry 8UWB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	45	48	first strand
Strand 2	C	156	159	parallel
Strand 3	C	163	166	anti-parallel
Strand 4	C	236	239	parallel
Strand 5	C	256	259	parallel
Strand 6	C	248	251	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	111	113	first strand
Strand 2	C	80	82	parallel
Strand 3	C	52	55	parallel
Strand 4	C	273	278	anti-parallel
Strand 5	C	284	289	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	202	203	first strand
Strand 2	C	218	220	parallel
Strand 3	C	210	211	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	45	48	first strand
Strand 2	F	156	159	parallel
Strand 3	F	163	166	anti-parallel
Strand 4	F	236	239	parallel
Strand 5	F	256	259	parallel
Strand 6	F	248	251	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	111	113	first strand
Strand 2	F	80	82	parallel
Strand 3	F	52	55	parallel
Strand 4	F	273	278	anti-parallel
Strand 5	F	284	289	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	202	203	first strand
Strand 2	F	218	220	parallel
Strand 3	F	210	211	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8UWB

Analysis of interatomic Contacts of Structural Units in PDB entry:
8UWB