Analysis of interatomic Contacts of Structural Units in PDB entry:
8UWC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8UWC entry

There is 1 chain in PDB entry 8UWC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 42THR 616
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 8UWC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
65 80Right-handed alpha
Helix 2
AA2
A
109 119Right-handed alpha
Helix 3
AA3
A
192 197Right-handed alpha
Helix 4
AA4
A
198 206Right-handed alpha
Helix 5
AA5
A
248 258Right-handed alpha
Helix 6
AA6
A
286 300Right-handed alpha
Helix 7
AA7
A
315 328Right-handed alpha
Helix 8
AA8
A
412 431Right-handed alpha
Helix 9
AA9
A
433 437Right-handed 310
Helix 10
AB1
A
438 449Right-handed alpha
Helix 11
AB2
A
457 462Right-handed alpha
Helix 12
AB3
A
467 478Right-handed alpha
Helix 13
AB4
A
499 503Right-handed 310
Helix 14
AB5
A
541 543Right-handed 310
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There are 7 sheets in PDB entry 8UWC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 46first strand
Strand 2
A
135 137anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
85 87first strand
Strand 2
A
103 106anti-parallel
Strand 3
A
49 59anti-parallel
Strand 4
A
125 133anti-parallel
Strand 5
A
283 285anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
231 233first strand
Strand 2
A
271 276parallel
Strand 3
A
213 218parallel
Strand 4
A
303 306parallel
Strand 5
A
331 335parallel
Strand 6
A
356 361parallel
Strand 7
A
391 394parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
398 401first strand
Strand 2
A
407 410anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
482 485first strand
Strand 2
A
512 520anti-parallel
Strand 3
A
559 568anti-parallel
Strand 4
A
545 550anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
489 490first strand
Strand 2
A
601 613parallel
Strand 3
A
577 589anti-parallel
Strand 4
A
533 536anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
489 490first strand
Strand 2
A
601 613parallel
Strand 3
A
577 589anti-parallel
Strand 4
A
526 528anti-parallel
Strand 5
A
554 555anti-parallel
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