Analysis of interatomic Contacts of Structural Units in PDB entry:
8UXT

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8UXT entry

There is 1 chain in PDB entry 8UXT (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 14	ALA 1483

There are 19 helices in PDB entry 8UXT. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	25	27	Right-handed 310
Helix 2	AA2	A	30	48	Right-handed alpha
Helix 3	AA3	A	51	57	Right-handed alpha
Helix 4	AA4	A	66	83	Right-handed alpha
Helix 5	AA5	A	87	103	Right-handed alpha
Helix 6	AA6	A	108	110	Right-handed 310
Helix 7	AA7	A	111	131	Right-handed alpha
Helix 8	AA8	A	137	152	Right-handed alpha
Helix 9	AA9	A	155	166	Right-handed alpha
Helix 10	AB1	A	166	186	Right-handed alpha
Helix 11	AB2	A	216	226	Right-handed alpha
Helix 12	AB3	A	244	261	Right-handed alpha
Helix 13	AB4	A	262	264	Right-handed 310
Helix 14	AB5	A	270	286	Right-handed alpha
Helix 15	AB6	A	367	371	Right-handed 310
Helix 16	AB7	A	407	412	Right-handed 310
Helix 17	AB8	A	1330	1334	Right-handed 310
Helix 18	AB9	A	1371	1376	Right-handed 310
Helix 19	AC1	A	1405	1410	Right-handed 310

There are 7 sheets in PDB entry 8UXT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	20	23	first strand
Strand 2	A	310	313	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	60	65	first strand
Strand 2	A	208	215	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	344	352	first strand
Strand 2	A	357	364	anti-parallel
Strand 3	A	379	380	anti-parallel

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There are 63 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	403	406	first strand
Strand 2	A	394	397	anti-parallel
Strand 3	A	386	389	anti-parallel
Strand 4	A	452	460	anti-parallel
Strand 5	A	466	474	anti-parallel
Strand 6	A	477	486	anti-parallel
Strand 7	A	491	498	anti-parallel
Strand 8	A	504	509	anti-parallel
Strand 9	A	517	521	anti-parallel
Strand 10	A	527	531	anti-parallel
Strand 11	A	537	542	anti-parallel
Strand 12	A	548	552	anti-parallel
Strand 13	A	558	563	anti-parallel
Strand 14	A	572	577	anti-parallel
Strand 15	A	584	588	anti-parallel
Strand 16	A	594	598	anti-parallel
Strand 17	A	604	609	anti-parallel
Strand 18	A	615	619	anti-parallel
Strand 19	A	625	630	anti-parallel
Strand 20	A	636	640	anti-parallel
Strand 21	A	646	651	anti-parallel
Strand 22	A	657	661	anti-parallel
Strand 23	A	667	672	anti-parallel
Strand 24	A	678	682	anti-parallel
Strand 25	A	688	693	anti-parallel
Strand 26	A	699	703	anti-parallel
Strand 27	A	709	714	anti-parallel
Strand 28	A	720	724	anti-parallel
Strand 29	A	730	735	anti-parallel
Strand 30	A	741	745	anti-parallel
Strand 31	A	751	756	anti-parallel
Strand 32	A	762	766	anti-parallel
Strand 33	A	772	777	anti-parallel
Strand 34	A	787	791	anti-parallel
Strand 35	A	797	802	anti-parallel
Strand 36	A	808	812	anti-parallel
Strand 37	A	818	823	anti-parallel
Strand 38	A	829	833	anti-parallel
Strand 39	A	839	844	anti-parallel
Strand 40	A	850	854	anti-parallel
Strand 41	A	860	865	anti-parallel
Strand 42	A	871	875	anti-parallel
Strand 43	A	881	886	anti-parallel
Strand 44	A	892	896	anti-parallel
Strand 45	A	900	906	anti-parallel
Strand 46	A	912	919	anti-parallel
Strand 47	A	925	932	anti-parallel
Strand 48	A	938	942	anti-parallel
Strand 49	A	946	952	anti-parallel
Strand 50	A	958	965	anti-parallel
Strand 51	A	973	981	anti-parallel
Strand 52	A	987	991	anti-parallel
Strand 53	A	997	1003	anti-parallel
Strand 54	A	1007	1013	anti-parallel
Strand 55	A	1017	1023	anti-parallel
Strand 56	A	1029	1034	anti-parallel
Strand 57	A	1038	1044	anti-parallel
Strand 58	A	1050	1057	anti-parallel
Strand 59	A	1069	1075	anti-parallel
Strand 60	A	1081	1086	anti-parallel
Strand 61	A	1090	1096	anti-parallel
Strand 62	A	1102	1106	anti-parallel
Strand 63	A	1111	1113	anti-parallel

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There are 53 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	415	416	first strand
Strand 2	A	423	426	anti-parallel
Strand 3	A	432	435	anti-parallel
Strand 4	A	440	446	anti-parallel
Strand 5	A	452	460	anti-parallel
Strand 6	A	466	474	anti-parallel
Strand 7	A	477	486	anti-parallel
Strand 8	A	491	498	anti-parallel
Strand 9	A	504	509	anti-parallel
Strand 10	A	517	521	anti-parallel
Strand 11	A	527	531	anti-parallel
Strand 12	A	537	542	anti-parallel
Strand 13	A	548	552	anti-parallel
Strand 14	A	558	563	anti-parallel
Strand 15	A	572	577	anti-parallel
Strand 16	A	584	588	anti-parallel
Strand 17	A	594	598	anti-parallel
Strand 18	A	604	609	anti-parallel
Strand 19	A	615	619	anti-parallel
Strand 20	A	625	630	anti-parallel
Strand 21	A	636	640	anti-parallel
Strand 22	A	646	651	anti-parallel
Strand 23	A	657	661	anti-parallel
Strand 24	A	667	672	anti-parallel
Strand 25	A	678	682	anti-parallel
Strand 26	A	688	693	anti-parallel
Strand 27	A	699	703	anti-parallel
Strand 28	A	709	714	anti-parallel
Strand 29	A	720	724	anti-parallel
Strand 30	A	730	735	anti-parallel
Strand 31	A	741	745	anti-parallel
Strand 32	A	751	756	anti-parallel
Strand 33	A	762	766	anti-parallel
Strand 34	A	772	777	anti-parallel
Strand 35	A	787	791	anti-parallel
Strand 36	A	797	802	anti-parallel
Strand 37	A	808	812	anti-parallel
Strand 38	A	818	823	anti-parallel
Strand 39	A	829	833	anti-parallel
Strand 40	A	839	844	anti-parallel
Strand 41	A	850	854	anti-parallel
Strand 42	A	860	865	anti-parallel
Strand 43	A	871	875	anti-parallel
Strand 44	A	881	886	anti-parallel
Strand 45	A	892	896	anti-parallel
Strand 46	A	900	906	anti-parallel
Strand 47	A	912	919	anti-parallel
Strand 48	A	925	932	anti-parallel
Strand 49	A	938	942	anti-parallel
Strand 50	A	946	952	anti-parallel
Strand 51	A	958	965	anti-parallel
Strand 52	A	973	981	anti-parallel
Strand 53	A	1252	1253	anti-parallel

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There are 15 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1141	1142	first strand
Strand 2	A	1145	1149	anti-parallel
Strand 3	A	1155	1160	anti-parallel
Strand 4	A	1163	1169	anti-parallel
Strand 5	A	1175	1180	anti-parallel
Strand 6	A	1183	1189	anti-parallel
Strand 7	A	1195	1200	anti-parallel
Strand 8	A	1203	1210	anti-parallel
Strand 9	A	1213	1220	anti-parallel
Strand 10	A	1226	1232	anti-parallel
Strand 11	A	1239	1245	anti-parallel
Strand 12	A	1286	1292	anti-parallel
Strand 13	A	1298	1302	anti-parallel
Strand 14	A	1308	1314	anti-parallel
Strand 15	A	1320	1325	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1343	1344	first strand
Strand 2	A	1351	1353	anti-parallel
Strand 3	A	1356	1359	anti-parallel
Strand 4	A	1364	1365	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8UXT

Analysis of interatomic Contacts of Structural Units in PDB entry:
8UXT