Analysis of interatomic Contacts of Structural Units in PDB entry:
8UY7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8UY7 entry

There are 2 chains in PDB entry 8UY7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLN 898
B
 MET 1GLN 898
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 78 helices in PDB entry 8UY7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
38 48Right-handed alpha
Helix 2
AA2
A
49 57Right-handed alpha
Helix 3
AA3
A
65 77Right-handed alpha
Helix 4
AA4
A
81 85Right-handed 310
Helix 5
AA5
A
88 98Right-handed alpha
Helix 6
AA6
A
99 114Right-handed alpha
Helix 7
AA7
A
119 153Right-handed alpha
Helix 8
AA8
A
177 179Right-handed 310
Helix 9
AA9
A
232 236Right-handed 310
Helix 10
AB1
A
258 262Right-handed 310
Helix 11
AB2
A
279 312Right-handed alpha
Helix 12
AB3
A
313 326Right-handed alpha
Helix 13
AB4
A
327 330Right-handed 310
Helix 14
AB5
A
331 350Right-handed alpha
Helix 15
AB6
A
359 367Right-handed alpha
Helix 16
AB7
A
396 410Right-handed alpha
Helix 17
AB8
A
415 425Right-handed alpha
Helix 18
AB9
A
426 437Right-handed alpha
Helix 19
AC1
A
471 477Right-handed alpha
Helix 20
AC2
A
491 507Right-handed alpha
Helix 21
AC3
A
528 532Right-handed 310
Helix 22
AC4
A
550 561Right-handed alpha
Helix 23
AC5
A
572 584Right-handed alpha
Helix 24
AC6
A
593 597Right-handed alpha
Helix 25
AC7
A
600 610Right-handed alpha
Helix 26
AC8
A
618 629Right-handed alpha
Helix 27
AC9
A
645 652Right-handed alpha
Helix 28
AD1
A
662 669Right-handed alpha
Helix 29
AD2
A
677 717Right-handed alpha
Helix 30
AD3
A
726 742Right-handed alpha
Helix 31
AD4
A
743 747Right-handed 310
Helix 32
AD5
A
762 773Right-handed alpha
Helix 33
AD6
A
773 790Right-handed alpha
Helix 34
AD7
A
795 797Right-handed 310
Helix 35
AD8
A
798 817Right-handed alpha
Helix 36
AD9
A
818 820Right-handed 310
Helix 37
AE1
A
834 851Right-handed alpha
Helix 38
AE2
A
855 860Right-handed alpha
Helix 39
AE3
A
868 895Right-handed alpha
Helix 40
AE4
B
38 48Right-handed alpha
Helix 41
AE5
B
49 57Right-handed alpha
Helix 42
AE6
B
65 77Right-handed alpha
Helix 43
AE7
B
81 85Right-handed 310
Helix 44
AE8
B
88 98Right-handed alpha
Helix 45
AE9
B
99 114Right-handed alpha
Helix 46
AF1
B
119 153Right-handed alpha
Helix 47
AF2
B
177 179Right-handed 310
Helix 48
AF3
B
232 236Right-handed 310
Helix 49
AF4
B
258 262Right-handed 310
Helix 50
AF5
B
279 312Right-handed alpha
Helix 51
AF6
B
313 326Right-handed alpha
Helix 52
AF7
B
327 330Right-handed 310
Helix 53
AF8
B
331 350Right-handed alpha
Helix 54
AF9
B
359 367Right-handed alpha
Helix 55
AG1
B
396 410Right-handed alpha
Helix 56
AG2
B
415 425Right-handed alpha
Helix 57
AG3
B
426 437Right-handed alpha
Helix 58
AG4
B
471 477Right-handed alpha
Helix 59
AG5
B
491 507Right-handed alpha
Helix 60
AG6
B
528 532Right-handed 310
Helix 61
AG7
B
550 561Right-handed alpha
Helix 62
AG8
B
572 583Right-handed alpha
Helix 63
AG9
B
595 599Right-handed 310
Helix 64
AH1
B
600 611Right-handed alpha
Helix 65
AH2
B
618 629Right-handed alpha
Helix 66
AH3
B
642 644Right-handed 310
Helix 67
AH4
B
645 652Right-handed alpha
Helix 68
AH5
B
662 669Right-handed alpha
Helix 69
AH6
B
677 717Right-handed alpha
Helix 70
AH7
B
726 742Right-handed alpha
Helix 71
AH8
B
743 747Right-handed 310
Helix 72
AH9
B
762 790Right-handed alpha
Helix 73
AI1
B
795 797Right-handed 310
Helix 74
AI2
B
798 817Right-handed alpha
Helix 75
AI3
B
817 822Right-handed alpha
Helix 76
AI4
B
834 851Right-handed alpha
Helix 77
AI5
B
855 860Right-handed alpha
Helix 78
AI6
B
868 895Right-handed alpha
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There are 10 sheets in PDB entry 8UY7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
172 175first strand
Strand 2
A
156 159anti-parallel
Strand 3
A
184 187anti-parallel
Strand 4
A
245 255anti-parallel
Strand 5
A
197 208anti-parallel
Strand 6
A
219 220anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
172 175first strand
Strand 2
A
156 159anti-parallel
Strand 3
A
184 187anti-parallel
Strand 4
A
245 255anti-parallel
Strand 5
A
197 208anti-parallel
Strand 6
A
239 240anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
353 355first strand
Strand 2
A
671 673anti-parallel
Strand 3
A
654 658parallel
Strand 4
A
636 639parallel
Strand 5
A
369 372parallel
Strand 6
A
564 568parallel
Strand 7
A
613 615parallel
Strand 8
A
591 592parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
385 389first strand
Strand 2
A
535 544anti-parallel
Strand 3
A
510 521anti-parallel
Strand 4
A
462 470anti-parallel
Strand 5
A
451 457anti-parallel
Strand 6
A
438 443anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
385 389first strand
Strand 2
A
535 544anti-parallel
Strand 3
A
478 483parallel
Strand 4
A
486 489anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
172 175first strand
Strand 2
B
156 159anti-parallel
Strand 3
B
184 187anti-parallel
Strand 4
B
245 255anti-parallel
Strand 5
B
197 208anti-parallel
Strand 6
B
219 220anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
172 175first strand
Strand 2
B
156 159anti-parallel
Strand 3
B
184 187anti-parallel
Strand 4
B
245 255anti-parallel
Strand 5
B
197 208anti-parallel
Strand 6
B
239 240anti-parallel
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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
353 355first strand
Strand 2
B
671 673anti-parallel
Strand 3
B
654 658parallel
Strand 4
B
636 639parallel
Strand 5
B
369 372parallel
Strand 6
B
564 568parallel
Strand 7
B
613 615parallel
Strand 8
B
591 592parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
385 389first strand
Strand 2
B
535 544anti-parallel
Strand 3
B
510 521anti-parallel
Strand 4
B
462 470anti-parallel
Strand 5
B
453 457anti-parallel
Strand 6
B
438 443anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
385 389first strand
Strand 2
B
535 544anti-parallel
Strand 3
B
478 483parallel
Strand 4
B
486 489anti-parallel
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