Analysis of interatomic Contacts of Structural Units in PDB entry:
8UZ4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8UZ4 entry

There are 3 chains in PDB entry 8UZ4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 13PHE 127
B
 SER 13PHE 127
C
 MET 14PHE 127
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 8UZ4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
26 46Right-handed alpha
Helix 2
AA2
A
83 100Right-handed alpha
Helix 3
AA3
A
104 106Right-handed 310
Helix 4
AA4
B
26 46Right-handed alpha
Helix 5
AA5
B
48 51Right-handed 310
Helix 6
AA6
B
83 100Right-handed alpha
Helix 7
AA7
B
104 106Right-handed 310
Helix 8
AA8
B
116 118Right-handed 310
Helix 9
AA9
C
26 46Right-handed alpha
Helix 10
AB1
C
48 51Right-handed 310
Helix 11
AB2
C
84 100Right-handed alpha
Helix 12
AB3
C
104 106Right-handed 310
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There are 3 sheets in PDB entry 8UZ4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
61 64first strand
Strand 2
A
53 57anti-parallel
Strand 3
A
16 21parallel
Strand 4
A
72 79anti-parallel
Strand 5
A
108 115parallel
Strand 6
C
120 122anti-parallel
Strand 7
C
125 126anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 64first strand
Strand 2
C
53 57anti-parallel
Strand 3
C
16 21parallel
Strand 4
C
72 79anti-parallel
Strand 5
C
108 115parallel
Strand 6
B
120 122anti-parallel
Strand 7
B
125 126anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 126first strand
Strand 2
A
120 122anti-parallel
Strand 3
B
108 115anti-parallel
Strand 4
B
72 79parallel
Strand 5
B
16 21anti-parallel
Strand 6
B
53 57parallel
Strand 7
C
61 64anti-parallel
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