Analysis of interatomic Contacts of Structural Units in PDB entry:
8UZ6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8UZ6 entry

There are 7 chains in PDB entry 8UZ6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 1	PHE 375
B	ASP 1	PHE 375
C	ASP 2	GLU 161
D	ILE 42	LEU 174
E	GLY 196	GLN 269
F	ALA 134	SER 215
G	ALA 134	SER 215

There are 57 helices in PDB entry 8UZ6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	56	60	Right-handed 310
Helix 2	AA2	A	61	63	Right-handed 310
Helix 3	AA3	A	78	92	Right-handed alpha
Helix 4	AA4	A	97	101	Right-handed 310
Helix 5	AA5	A	112	126	Right-handed alpha
Helix 6	AA6	A	137	145	Right-handed alpha
Helix 7	AA7	A	172	175	Right-handed 310
Helix 8	AA8	A	181	193	Right-handed alpha
Helix 9	AA9	A	194	196	Right-handed 310
Helix 10	AB1	A	204	217	Right-handed alpha
Helix 11	AB2	A	222	231	Right-handed alpha
Helix 12	AB3	A	257	262	Right-handed 310
Helix 13	AB4	A	273	284	Right-handed alpha
Helix 14	AB5	A	289	296	Right-handed alpha
Helix 15	AB6	A	301	306	Right-handed 310
Helix 16	AB7	A	308	321	Right-handed alpha
Helix 17	AB8	A	337	348	Right-handed alpha
Helix 18	AB9	A	350	355	Right-handed 310
Helix 19	AC1	A	359	366	Right-handed alpha
Helix 20	AC2	A	367	370	Right-handed 310
Helix 21	AC3	B	56	60	Right-handed 310
Helix 22	AC4	B	61	63	Right-handed 310
Helix 23	AC5	B	78	92	Right-handed alpha
Helix 24	AC6	B	97	101	Right-handed 310
Helix 25	AC7	B	112	126	Right-handed alpha
Helix 26	AC8	B	137	145	Right-handed alpha
Helix 27	AC9	B	172	175	Right-handed 310
Helix 28	AD1	B	181	193	Right-handed alpha
Helix 29	AD2	B	194	196	Right-handed 310
Helix 30	AD3	B	204	217	Right-handed alpha
Helix 31	AD4	B	222	231	Right-handed alpha
Helix 32	AD5	B	257	262	Right-handed 310
Helix 33	AD6	B	273	284	Right-handed alpha
Helix 34	AD7	B	289	296	Right-handed alpha
Helix 35	AD8	B	301	306	Right-handed 310
Helix 36	AD9	B	308	321	Right-handed alpha
Helix 37	AE1	B	337	348	Right-handed alpha
Helix 38	AE2	B	350	355	Right-handed 310
Helix 39	AE3	B	359	366	Right-handed alpha
Helix 40	AE4	B	367	370	Right-handed 310
Helix 41	AE5	C	3	11	Right-handed alpha
Helix 42	AE6	C	14	28	Right-handed alpha
Helix 43	AE7	C	39	49	Right-handed alpha
Helix 44	AE8	C	53	64	Right-handed alpha
Helix 45	AE9	C	73	85	Right-handed alpha
Helix 46	AF1	C	93	105	Right-handed alpha
Helix 47	AF2	C	113	125	Right-handed alpha
Helix 48	AF3	C	130	141	Right-handed alpha
Helix 49	AF4	C	149	157	Right-handed alpha
Helix 50	AF5	D	43	80	Right-handed alpha
Helix 51	AF6	D	90	137	Right-handed alpha
Helix 52	AF7	D	138	142	Right-handed 310
Helix 53	AF8	D	156	174	Right-handed alpha
Helix 54	AF9	E	197	212	Right-handed alpha
Helix 55	AG1	E	222	269	Right-handed alpha
Helix 56	AG2	F	135	215	Right-handed alpha
Helix 57	AG3	G	135	215	Right-handed alpha

There are 12 sheets in PDB entry 8UZ6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	17	19	first strand
Strand 2	A	29	31	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	53	54	first strand
Strand 2	A	35	38	anti-parallel
Strand 3	A	65	68	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	103	107	first strand
Strand 2	A	131	136	parallel
Strand 3	A	357	358	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	169	170	first strand
Strand 2	A	160	166	anti-parallel
Strand 3	A	176	178	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	169	170	first strand
Strand 2	A	160	166	anti-parallel
Strand 3	A	150	155	anti-parallel
Strand 4	A	297	300	parallel
Strand 5	A	329	330	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	238	242	first strand
Strand 2	A	245	250	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	17	19	first strand
Strand 2	B	29	31	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	53	54	first strand
Strand 2	B	35	38	anti-parallel
Strand 3	B	65	68	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	103	107	first strand
Strand 2	B	131	136	parallel
Strand 3	B	357	358	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	169	170	first strand
Strand 2	B	160	166	anti-parallel
Strand 3	B	176	178	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	169	170	first strand
Strand 2	B	160	166	anti-parallel
Strand 3	B	150	155	anti-parallel
Strand 4	B	297	300	parallel
Strand 5	B	329	330	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	238	242	first strand
Strand 2	B	245	250	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8UZ6

Analysis of interatomic Contacts of Structural Units in PDB entry:
8UZ6