Analysis of interatomic Contacts of Structural Units in PDB entry:
8V0W

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8V0W entry

There are 3 chains in PDB entry 8V0W (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
C	ARG 24	SER 1147
B	ARG 24	SER 1147
A	ARG 24	SER 1147

There are 66 helices in PDB entry 8V0W. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	C	294	304	Right-handed alpha
Helix 2	AA2	C	337	342	Right-handed alpha
Helix 3	AA3	C	365	370	Right-handed alpha
Helix 4	AA4	C	383	387	Right-handed 310
Helix 5	AA5	C	403	410	Right-handed 310
Helix 6	AA6	C	737	743	Right-handed alpha
Helix 7	AA7	C	746	754	Right-handed alpha
Helix 8	AA8	C	755	757	Right-handed 310
Helix 9	AA9	C	758	783	Right-handed alpha
Helix 10	AB1	C	816	826	Right-handed alpha
Helix 11	AB2	C	836	841	Right-handed alpha
Helix 12	AB3	C	848	856	Right-handed alpha
Helix 13	AB4	C	866	884	Right-handed alpha
Helix 14	AB5	C	886	890	Right-handed 310
Helix 15	AB6	C	897	909	Right-handed alpha
Helix 16	AB7	C	913	918	Right-handed alpha
Helix 17	AB8	C	919	941	Right-handed alpha
Helix 18	AB9	C	945	965	Right-handed alpha
Helix 19	AC1	C	966	968	Right-handed 310
Helix 20	AC2	C	976	984	Right-handed alpha
Helix 21	AC3	C	985	1033	Right-handed alpha
Helix 22	AC4	C	1116	1118	Right-handed 310
Helix 23	AC5	C	1140	1147	Right-handed alpha
Helix 24	AC6	B	294	303	Right-handed alpha
Helix 25	AC7	B	338	343	Right-handed alpha
Helix 26	AC8	B	366	371	Right-handed 310
Helix 27	AC9	B	403	411	Right-handed 310
Helix 28	AD1	B	417	422	Right-handed alpha
Helix 29	AD2	B	502	506	Right-handed 310
Helix 30	AD3	B	737	743	Right-handed alpha
Helix 31	AD4	B	746	754	Right-handed alpha
Helix 32	AD5	B	755	757	Right-handed 310
Helix 33	AD6	B	760	783	Right-handed alpha
Helix 34	AD7	B	816	826	Right-handed alpha
Helix 35	AD8	B	836	842	Right-handed alpha
Helix 36	AD9	B	848	856	Right-handed alpha
Helix 37	AE1	B	866	884	Right-handed alpha
Helix 38	AE2	B	897	909	Right-handed alpha
Helix 39	AE3	B	913	918	Right-handed alpha
Helix 40	AE4	B	919	941	Right-handed alpha
Helix 41	AE5	B	945	965	Right-handed alpha
Helix 42	AE6	B	966	968	Right-handed 310
Helix 43	AE7	B	976	984	Right-handed alpha
Helix 44	AE8	B	985	1032	Right-handed alpha
Helix 45	AE9	B	1140	1146	Right-handed alpha
Helix 46	AF1	A	294	304	Right-handed alpha
Helix 47	AF2	A	338	343	Right-handed alpha
Helix 48	AF3	A	417	422	Right-handed alpha
Helix 49	AF4	A	502	506	Right-handed 310
Helix 50	AF5	A	737	743	Right-handed alpha
Helix 51	AF6	A	746	754	Right-handed alpha
Helix 52	AF7	A	755	757	Right-handed 310
Helix 53	AF8	A	758	783	Right-handed alpha
Helix 54	AF9	A	816	826	Right-handed alpha
Helix 55	AG1	A	836	842	Right-handed alpha
Helix 56	AG2	A	848	856	Right-handed alpha
Helix 57	AG3	A	866	884	Right-handed alpha
Helix 58	AG4	A	886	890	Right-handed 310
Helix 59	AG5	A	897	908	Right-handed alpha
Helix 60	AG6	A	913	918	Right-handed alpha
Helix 61	AG7	A	919	941	Right-handed alpha
Helix 62	AG8	A	945	965	Right-handed alpha
Helix 63	AG9	A	966	968	Right-handed 310
Helix 64	AH1	A	976	984	Right-handed alpha
Helix 65	AH2	A	985	1032	Right-handed alpha
Helix 66	AH3	A	1141	1147	Right-handed alpha

There are 51 sheets in PDB entry 8V0W. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	25	30	first strand
Strand 2	C	61	66	anti-parallel
Strand 3	C	265	267	anti-parallel
Strand 4	C	93	94	anti-parallel
Strand 5	C	189	191	anti-parallel
Strand 6	C	200	208	anti-parallel
Strand 7	C	194	197	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	25	30	first strand
Strand 2	C	61	66	anti-parallel
Strand 3	C	265	267	anti-parallel
Strand 4	C	93	94	anti-parallel
Strand 5	C	189	191	anti-parallel
Strand 6	C	200	208	anti-parallel
Strand 7	C	224	229	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	48	53	first strand
Strand 2	C	273	279	anti-parallel
Strand 3	C	285	289	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	84	85	first strand
Strand 2	C	237	240	anti-parallel
Strand 3	C	104	107	anti-parallel
Strand 4	C	117	120	anti-parallel
Strand 5	C	127	129	anti-parallel
Strand 6	C	169	170	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	311	319	first strand
Strand 2	C	592	599	anti-parallel
Strand 3	C	609	612	anti-parallel
Strand 4	C	648	651	anti-parallel
Strand 5	C	642	645	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	324	326	first strand
Strand 2	C	539	543	parallel
Strand 3	C	546	554	anti-parallel
Strand 4	C	584	588	anti-parallel
Strand 5	C	575	577	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	354	358	first strand
Strand 2	C	395	400	anti-parallel
Strand 3	C	509	514	anti-parallel
Strand 4	C	435	436	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	361	362	first strand
Strand 2	C	524	525	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	452	453	first strand
Strand 2	C	493	494	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	565	566	first strand
Strand 2	A	42	43	parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	654	655	first strand
Strand 2	C	691	696	parallel
Strand 3	C	670	675	anti-parallel
Strand 4	C	664	665	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	701	703	first strand
Strand 2	A	787	789	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	711	715	first strand
Strand 2	C	1072	1076	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	718	722	first strand
Strand 2	C	1059	1069	anti-parallel
Strand 3	C	725	728	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	718	722	first strand
Strand 2	C	1059	1069	anti-parallel
Strand 3	C	1047	1056	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	733	736	first strand
Strand 2	C	858	861	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1120	1122	first strand
Strand 2	C	1086	1090	anti-parallel
Strand 3	C	1081	1083	anti-parallel
Strand 4	C	1133	1134	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1094	1097	first strand
Strand 2	C	1102	1105	anti-parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	28	30	first strand
Strand 2	B	61	64	anti-parallel
Strand 3	B	266	269	anti-parallel
Strand 4	B	90	94	anti-parallel
Strand 5	B	189	193	anti-parallel
Strand 6	B	204	208	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	36	37	first strand
Strand 2	B	222	223	parallel

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There are 7 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	42	43	first strand
Strand 2	A	565	567	parallel
Strand 3	A	573	577	anti-parallel
Strand 4	A	584	588	anti-parallel
Strand 5	A	550	554	anti-parallel
Strand 6	A	538	540	anti-parallel
Strand 7	A	324	325	parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	48	55	first strand
Strand 2	B	271	279	anti-parallel
Strand 3	B	285	290	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	84	85	first strand
Strand 2	B	237	238	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	101	104	first strand
Strand 2	B	240	242	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	128	129	first strand
Strand 2	B	169	170	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	201	202	first strand
Strand 2	B	228	229	anti-parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	311	319	first strand
Strand 2	B	592	599	anti-parallel
Strand 3	B	609	613	anti-parallel
Strand 4	B	648	651	anti-parallel
Strand 5	B	642	645	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	325	327	first strand
Strand 2	B	539	542	parallel
Strand 3	B	548	553	anti-parallel
Strand 4	B	586	588	anti-parallel

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There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	356	358	first strand
Strand 2	B	395	402	anti-parallel
Strand 3	B	508	515	anti-parallel
Strand 4	B	431	437	anti-parallel
Strand 5	B	379	380	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	452	453	first strand
Strand 2	B	493	494	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	654	660	first strand
Strand 2	B	691	697	parallel
Strand 3	B	670	675	anti-parallel
Strand 4	B	664	665	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	711	715	first strand
Strand 2	B	1072	1076	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	718	728	first strand
Strand 2	B	1059	1069	anti-parallel
Strand 3	B	1047	1056	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	733	736	first strand
Strand 2	B	858	861	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	787	789	first strand
Strand 2	A	701	703	parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1120	1122	first strand
Strand 2	B	1086	1090	anti-parallel
Strand 3	B	1081	1083	anti-parallel
Strand 4	B	1133	1134	parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1094	1097	first strand
Strand 2	B	1102	1105	anti-parallel

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There are 8 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	28	30	first strand
Strand 2	A	61	67	anti-parallel
Strand 3	A	263	268	anti-parallel
Strand 4	A	90	94	anti-parallel
Strand 5	A	188	197	anti-parallel
Strand 6	A	200	209	anti-parallel
Strand 7	A	222	227	anti-parallel
Strand 8	A	36	37	parallel

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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	48	49	first strand
Strand 2	A	275	279	anti-parallel
Strand 3	A	285	290	anti-parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	54	55	first strand
Strand 2	A	271	272	anti-parallel

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There are 3 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	84	85	first strand
Strand 2	A	237	240	anti-parallel
Strand 3	A	104	107	anti-parallel

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There are 5 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	311	319	first strand
Strand 2	A	592	599	anti-parallel
Strand 3	A	609	613	anti-parallel
Strand 4	A	648	651	anti-parallel
Strand 5	A	642	645	anti-parallel

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There are 5 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	354	358	first strand
Strand 2	A	395	402	anti-parallel
Strand 3	A	508	515	anti-parallel
Strand 4	A	431	437	anti-parallel
Strand 5	A	377	379	anti-parallel

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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	452	454	first strand
Strand 2	A	492	494	anti-parallel

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There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	473	474	first strand
Strand 2	A	488	489	anti-parallel

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There are 2 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	542	543	first strand
Strand 2	A	546	547	anti-parallel

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There are 4 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	654	655	first strand
Strand 2	A	691	696	parallel
Strand 3	A	670	675	anti-parallel
Strand 4	A	664	665	anti-parallel

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There are 5 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	711	713	first strand
Strand 2	A	1074	1078	anti-parallel
Strand 3	A	1094	1097	anti-parallel
Strand 4	A	1102	1105	anti-parallel
Strand 5	A	1113	1114	anti-parallel

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There are 3 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	718	728	first strand
Strand 2	A	1059	1069	anti-parallel
Strand 3	A	1047	1056	anti-parallel

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There are 2 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	733	736	first strand
Strand 2	A	858	861	anti-parallel

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There are 3 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1081	1083	first strand
Strand 2	A	1086	1090	anti-parallel
Strand 3	A	1120	1122	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8V0W

Analysis of interatomic Contacts of Structural Units in PDB entry:
8V0W