Analysis of interatomic Contacts of Structural Units in PDB entry:
8V10


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8V10 entry

There are 4 chains in PDB entry 8V10 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 113GLU 682
B
 ARG 151GLN 1451
C
 ASN 6LEU 98
D
 MET 1LEU 115
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 8V10. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
121 139Right-handed alpha
Helix 2
AA2
A
140 146Right-handed alpha
Helix 3
AA3
A
150 156Right-handed alpha
Helix 4
AA4
A
158 174Right-handed alpha
Helix 5
AA5
A
183 194Right-handed alpha
Helix 6
AA6
A
203 208Right-handed 310
Helix 7
AA7
A
214 246Right-handed alpha
Helix 8
AA8
A
249 255Right-handed alpha
Helix 9
AA9
A
260 292Right-handed alpha
Helix 10
AB1
A
297 681Right-handed alpha
Helix 11
AB2
B
1012 1023Right-handed alpha
Helix 12
AB3
B
1030 1035Right-handed alpha
Helix 13
AB4
B
1037 1053Right-handed alpha
Helix 14
AB5
B
1056 1065Right-handed alpha
Helix 15
AB6
B
1074 1102Right-handed alpha
Helix 16
AB7
B
1108 1113Right-handed alpha
Helix 17
AB8
B
1115 1137Right-handed alpha
Helix 18
AB9
B
1140 1450Right-handed alpha
Helix 19
AC1
C
10 21Right-handed alpha
Helix 20
AC2
C
24 54Right-handed alpha
Helix 21
AC3
C
86 95Right-handed alpha
Helix 22
AC4
D
3 5Right-handed 310
Helix 23
AC5
D
6 25Right-handed alpha
Helix 24
AC6
D
31 39Right-handed alpha
Helix 25
AC7
D
83 96Right-handed alpha
Helix 26
AC8
D
99 114Right-handed alpha
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There are 2 sheets in PDB entry 8V10. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
57 60first strand
Strand 2
C
65 69anti-parallel
Strand 3
C
76 80anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
41 45first strand
Strand 2
D
53 57anti-parallel
Strand 3
D
63 67anti-parallel
Strand 4
D
75 78anti-parallel
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