Analysis of interatomic Contacts of Structural Units in PDB entry:
8V2G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8V2G entry

There are 8 chains in PDB entry 8V2G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 118ASN 478
E
 ASP 2ALA 147
B
 ILE 118ASN 478
F
 ASP 2ALA 147
C
 ILE 118ASN 478
G
 ASP 2ALA 147
D
 ILE 118ASN 478
H
 ASP 2ALA 147
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 88 helices in PDB entry 8V2G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
123 160Right-handed alpha
Helix 2
AA2
A
165 202Right-handed alpha
Helix 3
AA3
A
205 209Right-handed 310
Helix 4
AA4
A
212 226Right-handed alpha
Helix 5
AA5
A
255 261Right-handed alpha
Helix 6
AA6
A
262 267Right-handed 310
Helix 7
AA7
A
268 278Right-handed alpha
Helix 8
AA8
A
283 293Right-handed alpha
Helix 9
AA9
A
298 310Right-handed alpha
Helix 10
AB1
A
312 335Right-handed alpha
Helix 11
AB2
A
345 358Right-handed alpha
Helix 12
AB3
A
369 396Right-handed alpha
Helix 13
AB4
A
401 439Right-handed alpha
Helix 14
AB5
A
445 478Right-handed alpha
Helix 15
AB6
E
5 17Right-handed alpha
Helix 16
AB7
E
28 38Right-handed alpha
Helix 17
AB8
E
44 56Right-handed alpha
Helix 18
AB9
E
64 76Right-handed alpha
Helix 19
AC1
E
80 93Right-handed alpha
Helix 20
AC2
E
102 112Right-handed alpha
Helix 21
AC3
E
117 129Right-handed alpha
Helix 22
AC4
E
138 147Right-handed alpha
Helix 23
AC5
B
123 158Right-handed alpha
Helix 24
AC6
B
165 201Right-handed alpha
Helix 25
AC7
B
205 209Right-handed 310
Helix 26
AC8
B
212 226Right-handed alpha
Helix 27
AC9
B
256 258Right-handed 310
Helix 28
AD1
B
260 267Right-handed 310
Helix 29
AD2
B
268 278Right-handed alpha
Helix 30
AD3
B
283 294Right-handed alpha
Helix 31
AD4
B
298 310Right-handed alpha
Helix 32
AD5
B
312 335Right-handed alpha
Helix 33
AD6
B
345 358Right-handed alpha
Helix 34
AD7
B
369 396Right-handed alpha
Helix 35
AD8
B
404 440Right-handed alpha
Helix 36
AD9
B
445 478Right-handed alpha
Helix 37
AE1
F
5 17Right-handed alpha
Helix 38
AE2
F
28 39Right-handed alpha
Helix 39
AE3
F
44 56Right-handed alpha
Helix 40
AE4
F
64 76Right-handed alpha
Helix 41
AE5
F
80 93Right-handed alpha
Helix 42
AE6
F
102 112Right-handed alpha
Helix 43
AE7
F
117 126Right-handed alpha
Helix 44
AE8
F
138 144Right-handed alpha
Helix 45
AE9
C
123 157Right-handed alpha
Helix 46
AF1
C
166 202Right-handed alpha
Helix 47
AF2
C
205 209Right-handed 310
Helix 48
AF3
C
212 226Right-handed alpha
Helix 49
AF4
C
256 258Right-handed 310
Helix 50
AF5
C
260 266Right-handed 310
Helix 51
AF6
C
267 278Right-handed alpha
Helix 52
AF7
C
283 293Right-handed alpha
Helix 53
AF8
C
298 310Right-handed alpha
Helix 54
AF9
C
312 335Right-handed alpha
Helix 55
AG1
C
345 358Right-handed alpha
Helix 56
AG2
C
369 396Right-handed alpha
Helix 57
AG3
C
401 440Right-handed alpha
Helix 58
AG4
C
445 478Right-handed alpha
Helix 59
AG5
G
5 18Right-handed alpha
Helix 60
AG6
G
28 39Right-handed alpha
Helix 61
AG7
G
44 56Right-handed alpha
Helix 62
AG8
G
64 77Right-handed alpha
Helix 63
AG9
G
80 92Right-handed alpha
Helix 64
AH1
G
102 112Right-handed alpha
Helix 65
AH2
G
117 129Right-handed alpha
Helix 66
AH3
G
138 147Right-handed alpha
Helix 67
AH4
D
123 160Right-handed alpha
Helix 68
AH5
D
165 202Right-handed alpha
Helix 69
AH6
D
205 209Right-handed 310
Helix 70
AH7
D
212 226Right-handed alpha
Helix 71
AH8
D
256 258Right-handed 310
Helix 72
AH9
D
260 267Right-handed 310
Helix 73
AI1
D
268 278Right-handed alpha
Helix 74
AI2
D
283 293Right-handed alpha
Helix 75
AI3
D
298 310Right-handed alpha
Helix 76
AI4
D
312 335Right-handed alpha
Helix 77
AI5
D
345 358Right-handed alpha
Helix 78
AI6
D
369 396Right-handed alpha
Helix 79
AI7
D
401 440Right-handed alpha
Helix 80
AI8
D
445 478Right-handed alpha
Helix 81
AI9
H
5 20Right-handed alpha
Helix 82
AJ1
H
28 39Right-handed alpha
Helix 83
AJ2
H
44 56Right-handed alpha
Helix 84
AJ3
H
64 76Right-handed alpha
Helix 85
AJ4
H
80 93Right-handed alpha
Helix 86
AJ5
H
102 112Right-handed alpha
Helix 87
AJ6
H
117 129Right-handed alpha
Helix 88
AJ7
H
140 146Right-handed alpha
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There are 8 sheets in PDB entry 8V2G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
235 241first strand
Strand 2
A
248 254anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
100 101first strand
Strand 2
E
135 136anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
235 241first strand
Strand 2
B
248 254anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
100 101first strand
Strand 2
F
135 136anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
235 241first strand
Strand 2
C
248 254anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
100 101first strand
Strand 2
G
135 136anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
235 241first strand
Strand 2
D
248 254anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
100 101first strand
Strand 2
H
135 136anti-parallel
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