Analysis of interatomic Contacts of Structural Units in PDB entry:
8V2H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8V2H entry

There are 8 chains in PDB entry 8V2H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 118ASN 478
E
 ASP 2ALA 147
B
 ILE 118ASN 478
F
 ASP 2ALA 147
C
 ILE 118ASN 478
G
 ASP 2ALA 147
D
 ILE 118ASN 478
H
 ASP 2ALA 147
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 94 helices in PDB entry 8V2H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
122 157Right-handed alpha
Helix 2
AA2
A
165 202Right-handed alpha
Helix 3
AA3
A
205 210Right-handed 310
Helix 4
AA4
A
212 226Right-handed alpha
Helix 5
AA5
A
255 261Right-handed alpha
Helix 6
AA6
A
262 266Right-handed 310
Helix 7
AA7
A
267 277Right-handed alpha
Helix 8
AA8
A
278 282Right-handed 310
Helix 9
AA9
A
285 294Right-handed alpha
Helix 10
AB1
A
300 310Right-handed alpha
Helix 11
AB2
A
313 335Right-handed alpha
Helix 12
AB3
A
345 358Right-handed alpha
Helix 13
AB4
A
369 397Right-handed alpha
Helix 14
AB5
A
401 439Right-handed alpha
Helix 15
AB6
A
445 478Right-handed alpha
Helix 16
AB7
E
5 18Right-handed alpha
Helix 17
AB8
E
31 39Right-handed alpha
Helix 18
AB9
E
44 55Right-handed alpha
Helix 19
AC1
E
64 77Right-handed alpha
Helix 20
AC2
E
80 92Right-handed alpha
Helix 21
AC3
E
102 112Right-handed alpha
Helix 22
AC4
E
117 129Right-handed alpha
Helix 23
AC5
E
138 145Right-handed alpha
Helix 24
AC6
B
123 157Right-handed alpha
Helix 25
AC7
B
165 201Right-handed alpha
Helix 26
AC8
B
205 209Right-handed 310
Helix 27
AC9
B
213 226Right-handed alpha
Helix 28
AD1
B
255 261Right-handed alpha
Helix 29
AD2
B
262 266Right-handed 310
Helix 30
AD3
B
267 277Right-handed alpha
Helix 31
AD4
B
278 282Right-handed 310
Helix 32
AD5
B
283 294Right-handed alpha
Helix 33
AD6
B
300 310Right-handed alpha
Helix 34
AD7
B
313 335Right-handed alpha
Helix 35
AD8
B
345 358Right-handed alpha
Helix 36
AD9
B
369 397Right-handed alpha
Helix 37
AE1
B
401 439Right-handed alpha
Helix 38
AE2
B
445 478Right-handed alpha
Helix 39
AE3
F
5 18Right-handed alpha
Helix 40
AE4
F
28 39Right-handed alpha
Helix 41
AE5
F
44 55Right-handed alpha
Helix 42
AE6
F
64 76Right-handed alpha
Helix 43
AE7
F
80 82Right-handed 310
Helix 44
AE8
F
83 92Right-handed alpha
Helix 45
AE9
F
102 112Right-handed alpha
Helix 46
AF1
F
117 126Right-handed alpha
Helix 47
AF2
F
138 145Right-handed alpha
Helix 48
AF3
C
119 157Right-handed alpha
Helix 49
AF4
C
165 201Right-handed alpha
Helix 50
AF5
C
205 210Right-handed 310
Helix 51
AF6
C
213 226Right-handed alpha
Helix 52
AF7
C
255 261Right-handed alpha
Helix 53
AF8
C
262 266Right-handed 310
Helix 54
AF9
C
267 277Right-handed alpha
Helix 55
AG1
C
278 282Right-handed 310
Helix 56
AG2
C
284 294Right-handed alpha
Helix 57
AG3
C
300 310Right-handed alpha
Helix 58
AG4
C
313 335Right-handed alpha
Helix 59
AG5
C
345 358Right-handed alpha
Helix 60
AG6
C
369 397Right-handed alpha
Helix 61
AG7
C
401 439Right-handed alpha
Helix 62
AG8
C
445 477Right-handed alpha
Helix 63
AG9
G
5 20Right-handed alpha
Helix 64
AH1
G
28 38Right-handed alpha
Helix 65
AH2
G
44 55Right-handed alpha
Helix 66
AH3
G
64 77Right-handed alpha
Helix 67
AH4
G
83 91Right-handed alpha
Helix 68
AH5
G
102 111Right-handed alpha
Helix 69
AH6
G
117 129Right-handed alpha
Helix 70
AH7
G
138 145Right-handed alpha
Helix 71
AH8
D
119 157Right-handed alpha
Helix 72
AH9
D
165 201Right-handed alpha
Helix 73
AI1
D
205 210Right-handed 310
Helix 74
AI2
D
213 226Right-handed alpha
Helix 75
AI3
D
255 261Right-handed alpha
Helix 76
AI4
D
262 266Right-handed 310
Helix 77
AI5
D
267 277Right-handed alpha
Helix 78
AI6
D
278 282Right-handed 310
Helix 79
AI7
D
283 294Right-handed alpha
Helix 80
AI8
D
300 310Right-handed alpha
Helix 81
AI9
D
313 335Right-handed alpha
Helix 82
AJ1
D
345 358Right-handed alpha
Helix 83
AJ2
D
369 398Right-handed alpha
Helix 84
AJ3
D
401 439Right-handed alpha
Helix 85
AJ4
D
445 478Right-handed alpha
Helix 86
AJ5
H
5 17Right-handed alpha
Helix 87
AJ6
H
18 20Right-handed 310
Helix 88
AJ7
H
28 38Right-handed alpha
Helix 89
AJ8
H
44 55Right-handed alpha
Helix 90
AJ9
H
64 77Right-handed alpha
Helix 91
AK1
H
83 92Right-handed alpha
Helix 92
AK2
H
103 111Right-handed alpha
Helix 93
AK3
H
117 129Right-handed alpha
Helix 94
AK4
H
138 145Right-handed alpha
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There are 8 sheets in PDB entry 8V2H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
235 241first strand
Strand 2
A
248 254anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
100 101first strand
Strand 2
E
135 136anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
235 241first strand
Strand 2
B
248 254anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
100 101first strand
Strand 2
F
135 136anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
235 241first strand
Strand 2
C
248 254anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
100 101first strand
Strand 2
G
135 136anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
235 241first strand
Strand 2
D
248 254anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
100 101first strand
Strand 2
H
135 136anti-parallel
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