Analysis of interatomic Contacts of Structural Units in PDB entry:
8V2T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8V2T entry

There is 1 chain in PDB entry 8V2T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 6LYS 196
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 8V2T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 25Right-handed alpha
Helix 2
AA2
A
26 46Right-handed alpha
Helix 3
AA3
A
56 71Right-handed alpha
Helix 4
AA4
A
88 99Right-handed alpha
Helix 5
AA5
A
100 104Right-handed 310
Helix 6
AA6
A
105 113Right-handed alpha
Helix 7
AA7
A
128 141Right-handed alpha
Helix 8
AA8
A
155 160Right-handed alpha
Helix 9
AA9
A
170 195Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8V2T.

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
82 84first strand
Strand 2
A
50 53parallel
Strand 3
A
118 122parallel
Strand 4
A
144 149parallel
Strand 5
A
162 165parallel
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