Analysis of interatomic Contacts of Structural Units in PDB entry:
8V32

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8V32 entry

There are 10 chains in PDB entry 8V32 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
Q	SER 4	THR 332
R	SER 4	GLY 346
S	SER 4	GLY 346
T	SER 4	GLY 346
U	SER 4	GLY 346
V	SER 4	GLY 346
W	SER 4	GLY 346
H	C 10	T 50
I	A 31	G 71
J	MET 1	LEU 462

There are142 helices in PDB entry 8V32. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	Q	8	13	Right-handed 310
Helix 2	AA2	Q	15	25	Right-handed alpha
Helix 3	AA3	Q	30	46	Right-handed alpha
Helix 4	AA4	Q	62	79	Right-handed alpha
Helix 5	AA5	Q	80	82	Right-handed 310
Helix 6	AA6	Q	105	117	Right-handed alpha
Helix 7	AA7	Q	121	125	Right-handed 310
Helix 8	AA8	Q	149	164	Right-handed alpha
Helix 9	AA9	Q	172	178	Right-handed 310
Helix 10	AB1	Q	181	186	Right-handed alpha
Helix 11	AB2	Q	189	200	Right-handed alpha
Helix 12	AB3	Q	208	214	Right-handed 310
Helix 13	AB4	Q	237	254	Right-handed alpha
Helix 14	AB5	Q	263	265	Right-handed 310
Helix 15	AB6	Q	266	273	Right-handed alpha
Helix 16	AB7	Q	277	295	Right-handed alpha
Helix 17	AB8	Q	301	308	Right-handed alpha
Helix 18	AB9	Q	311	330	Right-handed alpha
Helix 19	AC1	R	8	13	Right-handed 310
Helix 20	AC2	R	15	25	Right-handed alpha
Helix 21	AC3	R	30	46	Right-handed alpha
Helix 22	AC4	R	62	85	Right-handed alpha
Helix 23	AC5	R	105	119	Right-handed alpha
Helix 24	AC6	R	148	164	Right-handed alpha
Helix 25	AC7	R	173	178	Right-handed 310
Helix 26	AC8	R	186	200	Right-handed alpha
Helix 27	AC9	R	208	215	Right-handed 310
Helix 28	AD1	R	218	224	Right-handed alpha
Helix 29	AD2	R	237	254	Right-handed alpha
Helix 30	AD3	R	266	273	Right-handed alpha
Helix 31	AD4	R	277	295	Right-handed alpha
Helix 32	AD5	R	301	308	Right-handed alpha
Helix 33	AD6	R	311	330	Right-handed alpha
Helix 34	AD7	R	332	343	Right-handed alpha
Helix 35	AD8	S	8	13	Right-handed 310
Helix 36	AD9	S	15	26	Right-handed alpha
Helix 37	AE1	S	30	46	Right-handed alpha
Helix 38	AE2	S	62	83	Right-handed alpha
Helix 39	AE3	S	105	118	Right-handed alpha
Helix 40	AE4	S	148	164	Right-handed alpha
Helix 41	AE5	S	173	178	Right-handed 310
Helix 42	AE6	S	184	200	Right-handed alpha
Helix 43	AE7	S	208	215	Right-handed 310
Helix 44	AE8	S	218	224	Right-handed alpha
Helix 45	AE9	S	237	254	Right-handed alpha
Helix 46	AF1	S	266	275	Right-handed alpha
Helix 47	AF2	S	277	296	Right-handed alpha
Helix 48	AF3	S	301	308	Right-handed alpha
Helix 49	AF4	S	311	329	Right-handed alpha
Helix 50	AF5	S	332	344	Right-handed alpha
Helix 51	AF6	T	8	14	Right-handed 310
Helix 52	AF7	T	15	26	Right-handed alpha
Helix 53	AF8	T	30	46	Right-handed alpha
Helix 54	AF9	T	62	83	Right-handed alpha
Helix 55	AG1	T	105	118	Right-handed alpha
Helix 56	AG2	T	148	164	Right-handed alpha
Helix 57	AG3	T	173	178	Right-handed 310
Helix 58	AG4	T	184	200	Right-handed alpha
Helix 59	AG5	T	208	215	Right-handed 310
Helix 60	AG6	T	218	224	Right-handed alpha
Helix 61	AG7	T	237	254	Right-handed alpha
Helix 62	AG8	T	266	275	Right-handed alpha
Helix 63	AG9	T	277	296	Right-handed alpha
Helix 64	AH1	T	301	308	Right-handed alpha
Helix 65	AH2	T	311	329	Right-handed alpha
Helix 66	AH3	T	332	344	Right-handed alpha
Helix 67	AH4	U	8	13	Right-handed 310
Helix 68	AH5	U	15	26	Right-handed alpha
Helix 69	AH6	U	30	46	Right-handed alpha
Helix 70	AH7	U	62	85	Right-handed alpha
Helix 71	AH8	U	105	118	Right-handed alpha
Helix 72	AH9	U	148	164	Right-handed alpha
Helix 73	AI1	U	172	178	Right-handed 310
Helix 74	AI2	U	184	198	Right-handed alpha
Helix 75	AI3	U	208	215	Right-handed 310
Helix 76	AI4	U	218	224	Right-handed alpha
Helix 77	AI5	U	237	254	Right-handed alpha
Helix 78	AI6	U	266	275	Right-handed alpha
Helix 79	AI7	U	277	296	Right-handed alpha
Helix 80	AI8	U	301	308	Right-handed alpha
Helix 81	AI9	U	311	329	Right-handed alpha
Helix 82	AJ1	U	332	344	Right-handed alpha
Helix 83	AJ2	V	8	13	Right-handed 310
Helix 84	AJ3	V	15	25	Right-handed alpha
Helix 85	AJ4	V	30	46	Right-handed alpha
Helix 86	AJ5	V	62	78	Right-handed alpha
Helix 87	AJ6	V	78	85	Right-handed alpha
Helix 88	AJ7	V	105	118	Right-handed alpha
Helix 89	AJ8	V	148	164	Right-handed alpha
Helix 90	AJ9	V	172	178	Right-handed 310
Helix 91	AK1	V	184	199	Right-handed alpha
Helix 92	AK2	V	208	215	Right-handed 310
Helix 93	AK3	V	218	224	Right-handed alpha
Helix 94	AK4	V	237	254	Right-handed alpha
Helix 95	AK5	V	266	274	Right-handed alpha
Helix 96	AK6	V	277	296	Right-handed alpha
Helix 97	AK7	V	301	308	Right-handed alpha
Helix 98	AK8	V	311	329	Right-handed alpha
Helix 99	AK9	V	332	344	Right-handed alpha
Helix 100	AL1	W	8	13	Right-handed 310
Helix 101	AL2	W	15	25	Right-handed alpha
Helix 102	AL3	W	30	46	Right-handed alpha
Helix 103	AL4	W	62	77	Right-handed alpha
Helix 104	AL5	W	78	83	Right-handed alpha
Helix 105	AL6	W	105	119	Right-handed alpha
Helix 106	AL7	W	148	164	Right-handed alpha
Helix 107	AL8	W	173	178	Right-handed 310
Helix 108	AL9	W	184	200	Right-handed alpha
Helix 109	AM1	W	208	215	Right-handed 310
Helix 110	AM2	W	218	224	Right-handed alpha
Helix 111	AM3	W	237	255	Right-handed alpha
Helix 112	AM4	W	263	265	Right-handed 310
Helix 113	AM5	W	266	275	Right-handed alpha
Helix 114	AM6	W	277	295	Right-handed alpha
Helix 115	AM7	W	301	308	Right-handed alpha
Helix 116	AM8	W	311	330	Right-handed alpha
Helix 117	AM9	W	332	344	Right-handed alpha
Helix 118	AN1	J	40	52	Right-handed alpha
Helix 119	AN2	J	55	64	Right-handed alpha
Helix 120	AN3	J	70	75	Right-handed alpha
Helix 121	AN4	J	76	78	Right-handed 310
Helix 122	AN5	J	81	87	Right-handed alpha
Helix 123	AN6	J	88	91	Right-handed 310
Helix 124	AN7	J	95	110	Right-handed alpha
Helix 125	AN8	J	113	118	Right-handed 310
Helix 126	AN9	J	119	123	Right-handed 310
Helix 127	AO1	J	139	149	Right-handed alpha
Helix 128	AO2	J	156	161	Right-handed 310
Helix 129	AO3	J	219	244	Right-handed alpha
Helix 130	AO4	J	250	265	Right-handed alpha
Helix 131	AO5	J	268	277	Right-handed alpha
Helix 132	AO6	J	279	288	Right-handed alpha
Helix 133	AO7	J	294	306	Right-handed alpha
Helix 134	AO8	J	308	314	Right-handed alpha
Helix 135	AO9	J	324	329	Right-handed alpha
Helix 136	AP1	J	345	359	Right-handed alpha
Helix 137	AP2	J	366	375	Right-handed alpha
Helix 138	AP3	J	377	385	Right-handed alpha
Helix 139	AP4	J	385	425	Right-handed alpha
Helix 140	AP5	J	430	436	Right-handed alpha
Helix 141	AP6	J	442	446	Right-handed 310
Helix 142	AP7	J	448	461	Right-handed alpha

There are 11 sheets in PDB entry 8V32. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	91	95	first strand
Strand 2	Q	167	171	parallel
Strand 3	Q	202	205	parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	91	95	first strand
Strand 2	R	167	171	parallel
Strand 3	R	203	207	parallel
Strand 4	R	52	57	parallel
Strand 5	R	226	230	parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	92	95	first strand
Strand 2	S	167	171	parallel
Strand 3	S	202	206	parallel
Strand 4	S	52	57	parallel
Strand 5	S	225	230	parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	91	95	first strand
Strand 2	T	167	171	parallel
Strand 3	T	202	207	parallel
Strand 4	T	52	57	parallel
Strand 5	T	225	230	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	133	135	first strand
Strand 2	T	141	143	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	91	95	first strand
Strand 2	U	167	171	parallel
Strand 3	U	203	206	parallel
Strand 4	U	52	57	parallel
Strand 5	U	225	230	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	133	135	first strand
Strand 2	U	141	143	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	91	95	first strand
Strand 2	V	167	171	parallel
Strand 3	V	202	207	parallel
Strand 4	V	52	57	parallel
Strand 5	V	225	230	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	133	134	first strand
Strand 2	V	142	143	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	92	94	first strand
Strand 2	W	168	171	parallel
Strand 3	W	203	206	parallel
Strand 4	W	52	55	parallel
Strand 5	W	225	228	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	134	135	first strand
Strand 2	W	141	142	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8V32

Analysis of interatomic Contacts of Structural Units in PDB entry:
8V32