Analysis of interatomic Contacts of Structural Units in PDB entry:
8V3C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8V3C entry

There are 4 chains in PDB entry 8V3C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
D
 ARG 3GLN 397
A
 LYS 4LEU 473
B
 LYS 4LEU 473
C
 LYS 4LEU 473
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 51 helices in PDB entry 8V3C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
D
6 16Right-handed alpha
Helix 2
AA2
D
30 48Right-handed alpha
Helix 3
AA3
D
48 59Right-handed alpha
Helix 4
AA4
D
62 109Right-handed alpha
Helix 5
AA5
D
112 160Right-handed alpha
Helix 6
AA6
D
161 163Right-handed 310
Helix 7
AA7
D
181 238Right-handed alpha
Helix 8
AA8
D
240 294Right-handed alpha
Helix 9
AA9
D
298 338Right-handed alpha
Helix 10
AB1
D
340 344Right-handed 310
Helix 11
AB2
D
345 361Right-handed alpha
Helix 12
AB3
D
374 397Right-handed alpha
Helix 13
AB4
A
12 23Right-handed alpha
Helix 14
AB5
A
31 33Right-handed 310
Helix 15
AB6
A
34 63Right-handed alpha
Helix 16
AB7
A
67 93Right-handed alpha
Helix 17
AB8
A
93 102Right-handed alpha
Helix 18
AB9
A
110 112Right-handed 310
Helix 19
AC1
A
113 153Right-handed alpha
Helix 20
AC2
A
188 242Right-handed alpha
Helix 21
AC3
A
315 370Right-handed alpha
Helix 22
AC4
A
376 416Right-handed alpha
Helix 23
AC5
A
418 422Right-handed 310
Helix 24
AC6
A
423 437Right-handed alpha
Helix 25
AC7
A
452 473Right-handed alpha
Helix 26
AC8
B
12 23Right-handed alpha
Helix 27
AC9
B
31 33Right-handed 310
Helix 28
AD1
B
34 63Right-handed alpha
Helix 29
AD2
B
67 93Right-handed alpha
Helix 30
AD3
B
93 102Right-handed alpha
Helix 31
AD4
B
110 112Right-handed 310
Helix 32
AD5
B
113 153Right-handed alpha
Helix 33
AD6
B
188 242Right-handed alpha
Helix 34
AD7
B
315 370Right-handed alpha
Helix 35
AD8
B
376 416Right-handed alpha
Helix 36
AD9
B
418 422Right-handed 310
Helix 37
AE1
B
423 438Right-handed alpha
Helix 38
AE2
B
452 473Right-handed alpha
Helix 39
AE3
C
12 23Right-handed alpha
Helix 40
AE4
C
31 33Right-handed 310
Helix 41
AE5
C
34 63Right-handed alpha
Helix 42
AE6
C
67 93Right-handed alpha
Helix 43
AE7
C
93 102Right-handed alpha
Helix 44
AE8
C
103 106Right-handed 310
Helix 45
AE9
C
113 153Right-handed alpha
Helix 46
AF1
C
187 242Right-handed alpha
Helix 47
AF2
C
315 370Right-handed alpha
Helix 48
AF3
C
375 416Right-handed alpha
Helix 49
AF4
C
418 422Right-handed 310
Helix 50
AF5
C
423 438Right-handed alpha
Helix 51
AF6
C
452 473Right-handed alpha
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There are 2 sheets in PDB entry 8V3C. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
156 157first strand
Strand 2
B
170 171anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
156 157first strand
Strand 2
C
170 171anti-parallel
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