Analysis of interatomic Contacts of Structural Units in PDB entry:
8V3G

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8V3G entry

There are 8 chains in PDB entry 8V3G (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ILE 118	ASN 478
B	ILE 118	ASN 478
C	ILE 118	ASN 478
D	ILE 118	ASN 478
E	ASP 2	ALA 147
F	ASP 2	ALA 147
G	ASP 2	ALA 147
H	ASP 2	ALA 147

There are 89 helices in PDB entry 8V3G. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	118	160	Right-handed alpha
Helix 2	AA2	A	166	201	Right-handed alpha
Helix 3	AA3	A	205	210	Right-handed 310
Helix 4	AA4	A	213	227	Right-handed alpha
Helix 5	AA5	A	255	261	Right-handed alpha
Helix 6	AA6	A	262	266	Right-handed 310
Helix 7	AA7	A	267	277	Right-handed alpha
Helix 8	AA8	A	283	294	Right-handed alpha
Helix 9	AA9	A	298	310	Right-handed alpha
Helix 10	AB1	A	310	335	Right-handed alpha
Helix 11	AB2	A	345	358	Right-handed alpha
Helix 12	AB3	A	369	398	Right-handed alpha
Helix 13	AB4	A	401	436	Right-handed alpha
Helix 14	AB5	A	445	478	Right-handed alpha
Helix 15	AB6	B	119	160	Right-handed alpha
Helix 16	AB7	B	166	201	Right-handed alpha
Helix 17	AB8	B	205	210	Right-handed 310
Helix 18	AB9	B	211	227	Right-handed alpha
Helix 19	AC1	B	255	261	Right-handed alpha
Helix 20	AC2	B	262	266	Right-handed 310
Helix 21	AC3	B	267	277	Right-handed alpha
Helix 22	AC4	B	283	294	Right-handed alpha
Helix 23	AC5	B	298	310	Right-handed alpha
Helix 24	AC6	B	310	335	Right-handed alpha
Helix 25	AC7	B	345	358	Right-handed alpha
Helix 26	AC8	B	369	398	Right-handed alpha
Helix 27	AC9	B	404	440	Right-handed alpha
Helix 28	AD1	B	445	478	Right-handed alpha
Helix 29	AD2	C	119	157	Right-handed alpha
Helix 30	AD3	C	166	201	Right-handed alpha
Helix 31	AD4	C	205	210	Right-handed 310
Helix 32	AD5	C	211	227	Right-handed alpha
Helix 33	AD6	C	255	261	Right-handed alpha
Helix 34	AD7	C	262	266	Right-handed 310
Helix 35	AD8	C	267	277	Right-handed alpha
Helix 36	AD9	C	283	294	Right-handed alpha
Helix 37	AE1	C	298	310	Right-handed alpha
Helix 38	AE2	C	310	335	Right-handed alpha
Helix 39	AE3	C	345	358	Right-handed alpha
Helix 40	AE4	C	369	398	Right-handed alpha
Helix 41	AE5	C	401	440	Right-handed alpha
Helix 42	AE6	C	445	478	Right-handed alpha
Helix 43	AE7	D	119	160	Right-handed alpha
Helix 44	AE8	D	166	201	Right-handed alpha
Helix 45	AE9	D	205	210	Right-handed 310
Helix 46	AF1	D	211	227	Right-handed alpha
Helix 47	AF2	D	255	261	Right-handed alpha
Helix 48	AF3	D	262	266	Right-handed 310
Helix 49	AF4	D	267	277	Right-handed alpha
Helix 50	AF5	D	283	294	Right-handed alpha
Helix 51	AF6	D	298	310	Right-handed alpha
Helix 52	AF7	D	310	335	Right-handed alpha
Helix 53	AF8	D	345	358	Right-handed alpha
Helix 54	AF9	D	369	397	Right-handed alpha
Helix 55	AG1	D	401	440	Right-handed alpha
Helix 56	AG2	D	445	478	Right-handed alpha
Helix 57	AG3	E	5	20	Right-handed alpha
Helix 58	AG4	E	28	39	Right-handed alpha
Helix 59	AG5	E	44	56	Right-handed alpha
Helix 60	AG6	E	64	77	Right-handed alpha
Helix 61	AG7	E	80	93	Right-handed alpha
Helix 62	AG8	E	102	112	Right-handed alpha
Helix 63	AG9	E	117	129	Right-handed alpha
Helix 64	AH1	E	140	145	Right-handed alpha
Helix 65	AH2	F	5	20	Right-handed alpha
Helix 66	AH3	F	28	39	Right-handed alpha
Helix 67	AH4	F	44	56	Right-handed alpha
Helix 68	AH5	F	64	77	Right-handed alpha
Helix 69	AH6	F	80	93	Right-handed alpha
Helix 70	AH7	F	102	112	Right-handed alpha
Helix 71	AH8	F	117	129	Right-handed alpha
Helix 72	AH9	F	141	147	Right-handed alpha
Helix 73	AI1	G	5	20	Right-handed alpha
Helix 74	AI2	G	28	39	Right-handed alpha
Helix 75	AI3	G	44	56	Right-handed alpha
Helix 76	AI4	G	64	77	Right-handed alpha
Helix 77	AI5	G	80	93	Right-handed alpha
Helix 78	AI6	G	102	112	Right-handed alpha
Helix 79	AI7	G	117	129	Right-handed alpha
Helix 80	AI8	G	139	147	Right-handed alpha
Helix 81	AI9	H	5	20	Right-handed alpha
Helix 82	AJ1	H	28	39	Right-handed alpha
Helix 83	AJ2	H	44	56	Right-handed alpha
Helix 84	AJ3	H	64	76	Right-handed alpha
Helix 85	AJ4	H	80	93	Right-handed alpha
Helix 86	AJ5	H	101	112	Right-handed alpha
Helix 87	AJ6	H	117	129	Right-handed alpha
Helix 88	AJ7	H	137	139	Right-handed 310
Helix 89	AJ8	H	140	147	Right-handed alpha

There are 7 sheets in PDB entry 8V3G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	235	241	first strand
Strand 2	A	248	254	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	235	241	first strand
Strand 2	B	248	254	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	235	241	first strand
Strand 2	C	248	254	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	235	241	first strand
Strand 2	D	248	254	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	99	101	first strand
Strand 2	E	135	137	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	99	101	first strand
Strand 2	F	135	137	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	99	101	first strand
Strand 2	G	135	137	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8V3G

Analysis of interatomic Contacts of Structural Units in PDB entry:
8V3G