Analysis of interatomic
Contacts of Structural
Units in PDB entry:
Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332).
This page provides analyses of
contacts formed by:
For analysis of ligand-protein contacts, use:
3D structure can be seen in additional window with
STING software for 8V5X entry
There are 10 chains in PDB entry 8V5X
(CSU analysis of residue contacts immediately below table)
| Chain ID |
Initial residue | Terminal residue |
A
|
LEU 2 | LEU 2 |
A
|
ALA 4 | ALA 4 |
A
|
ALA 6 | ALA 6 |
A
|
GLN 8 | GLN 8 |
A
|
LEU 10 | LEU 10 |
B
|
LEU 2 | LEU 2 |
B
|
ALA 4 | ALA 4 |
B
|
ALA 6 | ALA 6 |
B
|
GLN 8 | GLN 8 |
B
|
LEU 10 | LEU 10 |
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There are 2
helices in PDB entry 8V5X. Click on helix of interest for
CSU analysis.
Helix number
| Helix ID | Chain ID |
Initial residue | Terminal residue |
Helix class |
| Helix 1 |
AA1 | A
| 2 |
8 | Right-handed alpha |
| Helix 2 |
AA2 | B
| 3 |
10 | Right-handed alpha |
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There are no sheets in PDB entry
8V5X
Please mail
questions/suggestions concerning this page
to
Vladimir.Sobolev@weizmann.
ac.il