Analysis of interatomic Contacts of Structural Units in PDB entry:
8V9O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8V9O entry

There are 6 chains in PDB entry 8V9O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 14SER 172
B
 ARG 14SER 172
C
 ARG 14GLU 169
D
 ASP 22ALA 322
E
 SER 23ALA 321
F
 ASP 22PRO 236
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 57 helices in PDB entry 8V9O. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
25 45Right-handed alpha
Helix 2
AA2
A
49 72Right-handed alpha
Helix 3
AA3
A
80 98Right-handed alpha
Helix 4
AA4
A
109 137Right-handed alpha
Helix 5
AA5
A
139 172Right-handed alpha
Helix 6
AA6
B
25 45Right-handed alpha
Helix 7
AA7
B
49 72Right-handed alpha
Helix 8
AA8
B
80 98Right-handed alpha
Helix 9
AA9
B
109 137Right-handed alpha
Helix 10
AB1
B
139 172Right-handed alpha
Helix 11
AB2
C
25 45Right-handed alpha
Helix 12
AB3
C
49 72Right-handed alpha
Helix 13
AB4
C
80 98Right-handed alpha
Helix 14
AB5
C
109 137Right-handed alpha
Helix 15
AB6
C
139 169Right-handed alpha
Helix 16
AB7
D
23 46Right-handed alpha
Helix 17
AB8
D
48 72Right-handed alpha
Helix 18
AB9
D
79 98Right-handed alpha
Helix 19
AC1
D
109 134Right-handed alpha
Helix 20
AC2
D
139 178Right-handed alpha
Helix 21
AC3
D
179 189Right-handed alpha
Helix 22
AC4
D
202 211Right-handed alpha
Helix 23
AC5
D
212 223Right-handed alpha
Helix 24
AC6
D
235 243Right-handed alpha
Helix 25
AC7
D
245 255Right-handed alpha
Helix 26
AC8
D
268 276Right-handed alpha
Helix 27
AC9
D
278 288Right-handed alpha
Helix 28
AD1
D
301 309Right-handed alpha
Helix 29
AD2
D
311 320Right-handed alpha
Helix 30
AD3
E
24 46Right-handed alpha
Helix 31
AD4
E
48 72Right-handed alpha
Helix 32
AD5
E
79 98Right-handed alpha
Helix 33
AD6
E
109 134Right-handed alpha
Helix 34
AD7
E
139 178Right-handed alpha
Helix 35
AD8
E
179 189Right-handed alpha
Helix 36
AD9
E
202 211Right-handed alpha
Helix 37
AE1
E
212 223Right-handed alpha
Helix 38
AE2
E
235 243Right-handed alpha
Helix 39
AE3
E
245 255Right-handed alpha
Helix 40
AE4
E
268 276Right-handed alpha
Helix 41
AE5
E
278 288Right-handed alpha
Helix 42
AE6
E
301 309Right-handed alpha
Helix 43
AE7
E
311 321Right-handed alpha
Helix 44
AE8
F
23 46Right-handed alpha
Helix 45
AE9
F
48 72Right-handed alpha
Helix 46
AF1
F
79 98Right-handed alpha
Helix 47
AF2
F
109 134Right-handed alpha
Helix 48
AF3
F
139 178Right-handed alpha
Helix 49
AF4
F
179 189Right-handed alpha
Helix 50
AF5
F
202 211Right-handed alpha
Helix 51
AF6
F
212 223Right-handed alpha
Helix 52
AF7
F
235 243Right-handed alpha
Helix 53
AF8
F
245 255Right-handed alpha
Helix 54
AF9
F
268 276Right-handed alpha
Helix 55
AG1
F
278 288Right-handed alpha
Helix 56
AG2
F
301 309Right-handed alpha
Helix 57
AG3
F
311 320Right-handed alpha
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There are no sheets in PDB entry 8V9O
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il