Analysis of interatomic Contacts of Structural Units in PDB entry:
8VAE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8VAE entry

There is 1 chain in PDB entry 8VAE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2ALA 582
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 8VAE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 15Right-handed alpha
Helix 2
AA2
A
15 31Right-handed alpha
Helix 3
AA3
A
35 56Right-handed alpha
Helix 4
AA4
A
65 79Right-handed alpha
Helix 5
AA5
A
89 93Right-handed 310
Helix 6
AA6
A
96 105Right-handed alpha
Helix 7
AA7
A
119 130Right-handed alpha
Helix 8
AA8
A
131 146Right-handed alpha
Helix 9
AA9
A
150 168Right-handed alpha
Helix 10
AB1
A
174 223Right-handed alpha
Helix 11
AB2
A
227 247Right-handed alpha
Helix 12
AB3
A
249 266Right-handed alpha
Helix 13
AB4
A
267 272Right-handed alpha
Helix 14
AB5
A
273 279Right-handed 310
Helix 15
AB6
A
282 292Right-handed alpha
Helix 16
AB7
A
305 310Right-handed alpha
Helix 17
AB8
A
314 322Right-handed alpha
Helix 18
AB9
A
322 338Right-handed alpha
Helix 19
AC1
A
342 360Right-handed alpha
Helix 20
AC2
A
365 371Right-handed alpha
Helix 21
AC3
A
372 375Right-handed 310
Helix 22
AC4
A
376 399Right-handed alpha
Helix 23
AC5
A
399 415Right-handed alpha
Helix 24
AC6
A
419 438Right-handed alpha
Helix 25
AC7
A
441 466Right-handed alpha
Helix 26
AC8
A
470 479Right-handed alpha
Helix 27
AC9
A
483 491Right-handed alpha
Helix 28
AD1
A
503 508Right-handed 310
Helix 29
AD2
A
511 516Right-handed alpha
Helix 30
AD3
A
517 536Right-handed alpha
Helix 31
AD4
A
540 560Right-handed alpha
Helix 32
AD5
A
563 582Right-handed alpha
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There are no sheets in PDB entry 8VAE
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